Gene Shewmr4_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2103 
Symbol 
ID4252676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2507517 
End bp2509142 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content47% 
IMG OID638118727 
Productsulfatase 
Protein accessionYP_734233 
Protein GI113970440 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.381763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.850087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACGA GATTTAAAAC CCTAACTGTG AATCGCTTCA CCTTCCTCAC CGCATTATTT 
TACGTTTGCG TTTTTAATAT CCCTCTCTTT GAAGTCATCA AAAAAGGCAT TGAAAAACAA
CCTGATGTGG ATCCGATCTT TATCGCCACT ATGCCGCTGT TTTTAACCTT TGCACTGAGT
TTTGTGTTTT CACTGTTTAC GGTGAAGTAT CTGGTAAAAC CCTTTTTCAT CATTCTTACG
CTGCTCTCCT CGAGCGTGTT TTTTGCCGCG CTTAAATACA ATGTCGTCTT CGACTACGGC
ATGATTGAAA ACACCTTTCA AACCAACAGC GCTGAAGCCT TGATGTATGT GAACTTTGCT
TCCATTCTCA ACATGCTGCT CACGGGGATT TTACCCGCCT ATTTAATTTA TAAAGCCGAT
ATCCAATACA AGCCATTTTT TAAAGAATTG CTGCATAAAG TTTTGTTTAT GCTGGCGATG
CTCGCGGGGC TGGGGATTAT CGCCTTCTTC TATTTCCAAG ATTACGCCGC CTTTGGTCGC
AATAATGATG AGATCAAGCG CTATATCGTG CCGACCTATT TTATTGGTGC GGCCTCTAAA
TACATTAACG TGCATTATTT GCAAACGCCG ATGGAATATC AGCAACTGGG CTTGGATGCA
AAAAATGTGA CGACCAATGC CAACGGCAAA CCTAACCTGT TAGTGCTGGT GGTGGGTGAG
ACCGCTCGTT CGATGAACTA TCAATACTAT GGATATGATA GACCGACCAA TGCTCACACT
GAGGGGCAAG GCTTAATCGC CTTTAAAGAT ACCCATTCCT GCGGTACGGC CACTGCGGTC
TCGCTGCCTT GCATGTTCTC GCGTATGGGA CGTGAGGATT ACGATTCTCG CCGCGCCTAT
GCCCAAGACA CGGCTATGGA TGTACTGAAT CACGGCGGGA TTAAAGTGCA GTGGTTTGAT
AATGACTCGG GTTGTAAAGG GGTGTGCGAT CAGGTTGAAA ACATCACCAT CGACCTTAAT
AGCGATCCTG AACTCTGTTC GGGCCAATAT TGTTTCGACC AAGTGCTGCT CAATAAACTC
GATGAAGCCT TAGCCAATGC GGAGCAGAAA GACACTGTGA TTGCCCTGCA TGTGATCGGC
AGCCATGGGC CGACGTACTT CCTGCGTTAT CCGCCAGAGC ACCGTAAATT TACGCCGGAT
TGCCCACGCA GTGATATTCA AAACTGCAGC GCCGAAGAGC TGATGAACAC CTATGACAAC
ACGATTTTGT ATACCGATTA CATCATTAGT GAAGTGGTGA ATAAGCTTAA ACAGCAACAA
GCTAAGTTTG ATACAGCCAT GTTCTATGTG TCGGACCACG GCGAATCTCT GGGTGAGAAA
GGCATGTATC TGCATGGTGC GCCGTACAGC ATCGCGCCGA TTGAACAAAC CAGTATTCCT
ATGCTGGCCT GGGTGTCGGA GGATTTCAGC CAAGACAACC ATTTAAATAT GGCGTGTTTG
GCCAAAGAGG CTGAGAAGGG GGGCTTCTCC CACGACAATC TGTTCGACAG TCTGTTGGGA
TTAATGAACG TACAGACCCA AGTGTATCAG CCTAAGTTAG ATATTTTTGC CCGCTGCCGC
GGTTAA
 
Protein sequence
MLTRFKTLTV NRFTFLTALF YVCVFNIPLF EVIKKGIEKQ PDVDPIFIAT MPLFLTFALS 
FVFSLFTVKY LVKPFFIILT LLSSSVFFAA LKYNVVFDYG MIENTFQTNS AEALMYVNFA
SILNMLLTGI LPAYLIYKAD IQYKPFFKEL LHKVLFMLAM LAGLGIIAFF YFQDYAAFGR
NNDEIKRYIV PTYFIGAASK YINVHYLQTP MEYQQLGLDA KNVTTNANGK PNLLVLVVGE
TARSMNYQYY GYDRPTNAHT EGQGLIAFKD THSCGTATAV SLPCMFSRMG REDYDSRRAY
AQDTAMDVLN HGGIKVQWFD NDSGCKGVCD QVENITIDLN SDPELCSGQY CFDQVLLNKL
DEALANAEQK DTVIALHVIG SHGPTYFLRY PPEHRKFTPD CPRSDIQNCS AEELMNTYDN
TILYTDYIIS EVVNKLKQQQ AKFDTAMFYV SDHGESLGEK GMYLHGAPYS IAPIEQTSIP
MLAWVSEDFS QDNHLNMACL AKEAEKGGFS HDNLFDSLLG LMNVQTQVYQ PKLDIFARCR
G