Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2058 |
Symbol | |
ID | 4252631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2449521 |
End bp | 2450189 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118677 |
Product | radical activating enzyme |
Protein accession | YP_734188 |
Protein GI | 113970395 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00725057 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACC CAGTCAACGA AGTCTTTGAA ACCATTCAAG GTGAAGGTGT CTTTACCGGA GTGCCCGCCA TTTTTGTGCG TTTACAGGGT TGCCCTGTGG GATGTGCATG GTGTGATACG AAACAGACTT GGGGTCTGCT TGAGGAAAAT AAGGTGTCAC CCCAACAAGT GATTACCGTC GATGGCTCCG TGGGGCGCTG GGCTAATCAT ACGGCGCAGA GTCTTATTGA GGCGTTCAAC GCTAAGGGAT ACACGGCGCG CCATGTGGTG ATCACAGGTG GTGAGCCTTG TATGTACGAT CTGAATGAAC TAACTCACAC GCTTCATGCT GCCGGTTTTG CCACTCAAAT CGAGACCAGT GGCACCTTTG AGGTGAAGTG CGATGCTGAT ACCTGGGTGA CTGTCTCGCC CAAGGTGAAT ATGAAGGGCG GTTATCAGGT GTTAGCGCAA GCCTTGACTC GCGCCAACGA GATAAAGCAT CCGATAGCGA CCGAAAATCA TATCGACGAA CTCGATGAGT TACTCAAAGG GATTGATGTG TCAGTGAAAA CTATTTGTCT GCAACCGATC AGCCAAAAAC CAAGGGCGAC GGAATTAGCC ATGAAGGTGT GTATTGCCCG CAACTGGCGT TTATCGATTC AGACCCATAA GTACCTGAAT ATCGATTAA
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Protein sequence | MNYPVNEVFE TIQGEGVFTG VPAIFVRLQG CPVGCAWCDT KQTWGLLEEN KVSPQQVITV DGSVGRWANH TAQSLIEAFN AKGYTARHVV ITGGEPCMYD LNELTHTLHA AGFATQIETS GTFEVKCDAD TWVTVSPKVN MKGGYQVLAQ ALTRANEIKH PIATENHIDE LDELLKGIDV SVKTICLQPI SQKPRATELA MKVCIARNWR LSIQTHKYLN ID
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