| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2049 |
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| Symbol | |
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| ID | 4252622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2438328 |
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| End bp | 2440607 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118665 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_734179 |
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| Protein GI | 113970386 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.156017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.197509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACGA TTATAATTAT TGCCCTGATT GCGATTATTG CGCTGTTTGC AGTAAAGAGC
CTTCGGATGC AATTTATCAC CCAGCCGGTT TTTCACTTCT TTAAAAAAGT ATTACCGCCA
TTATCCGATA CCGAGCGCGA AGCGATGGAA GCGGGTGATG TGTGGTGGGA AGGCGAGCTA
TTCCGCGGTA ATCCAAATTG GAATACCCTG CACAGCTACG GTAAACCCAC ACTCACGGCT
GAAGAGAAAG ACTTTATCGA TAATCAGGTG ATGACCGCCC TGAAGATGAT CGATGATTTT
GATATCGTGC ATAACCGTAA GGATTTGCCA CCAGAGCTGT GGGACTACTT TAAGAAAGAA
GGCTTTTTTG CGCTGATCAT CCCGAAAAAG TTTGGTGGTC GTGCGTTTTC TGCCTACGCC
AACTCGACGA TTGTGAGTAA ATTAGCCAGC CGCAGCGTGA GTGCCGCGGT CACTGTGATG
GTGCCAAACT CATTAGGCCC TGGTGAGCTT TTGACTCACT ATGGCACTAA GGAGCAAAAG
GAGCGCTGGT TACCTGCATT AGCTAAGGGT GATGAGATCC CATGCTTTGC ATTAACTGGT
CCAGAAGCAG GTAGTGATGC GGGCGCTATC CCCGATGTGG GTATTGTTTG CCGTGGTGAG
TTTAACGGTG AAGAAGTTTT AGGCCTGAAA TTAACCTGGG ACAAGCGTTA TATTACCCTC
GCACCAGTGG CAACCGTATT AGGTTTAGCC TTCCAGATGC GCGATCCTGA TGGTTTGCTT
GGTGATAAAA AGAATTTAGG TATTACCTGT GCCTTGATCC CAACCGATCA TCCTGGTGTT
GTCATTGGCC GTCGTCATAA TCCGCTCAAC ATGGCGTTTA TGAACGGGAC TACTAAGGGC
GAAGAAGTCT TTATTCCGCT GGATTGGATC ATCGGTGGTC CTGAGTTTGC GGGCAGAGGC
TGGCGCATGC TGGTTGAATG TTTATCGGCG GGTCGCGGTA TTTCTCTGCC TGCATTGGCT
ACCGCGTCTG GCCATATGGC GACCAAAACC ACCACGGCTT ACAGCTATGT GCGTCATCAA
TTTGGTATGG CGATTGGCAA CTTTGAAGGT GTGCAGGAAG CGCTGGCGCG CATTATCGCC
AATACTTATC AATTGGAAGC GGCGCGCCGT TTAACCACCA CGGGGATCGA TCTTAAAGTT
AAACCTTCAG TGGTGACAGC GATTGCCAAA TTCCACATGA CTGAACTTGG CCGCGCGGTG
ATGAACGATG CGATGGATAT TCAGTCGGGT AAGGGCATTC AATTAGGACC TAAAAACTAC
TTAGGCCACC CTTATATGTC GAATCCTATT TCGATTACCG TTGAAGGAGC GAACATTTTG
ACGCGTTCCT TGATGATTTT TGGTCAAGGT GCAACCCGTT GCCATCCTTA TGTGTTGGCC
GAAATGGAAG CCGCGGCGAT GGAAAACGAG CACGATGCGC TCGAGCGTTT CGACTCGCTG
TTAATGGGTC ATATGGGTTA CGCCACTCGT AACGCGTTTA GCGCCTTATT CAACGCCTTG
ACTGCCAGCC GCTTTGGTAG TGCGCCAGTG AGCGGTGAAA CTAAGCAGTA TTATAAAGAT
ATGTCGCGCA TTTCATCGGC ATTAGCCTTG ATGACAGATA TTTCGATGCT GATCATGGGC
GGCGATTTGA AGCGTAAGGA AATGTTGTCG GCACGTATGG GGGATGTGTT AAGCCAGCTG
TACTTAGGCT CGGCTACCCT AAAACTGTTT GAAGACAATG GCCGTCAACA GGACGATTTA
CCCGCGGTGC GTTATGTGAT GGCAAATCGC TTGCACTTAG CAGCTAAAGC GCTTGAAGAA
GTGATCCGTA ACTTCCCGAA CCGCCCATTT GCATGGCTGC TACGTGCGCT GATTTTCCCC
ATCGGCAACC ATTTCAACGC GCCTAGCGAT AAAATGGGGA CCGAATTGGT CTCTGGCATG
TTAAAACCAA GTCCTGCCCG TGAACGCATT ACTTTCCTAT GCCCTGAGTT TGAAGGCGAC
GTGGGTGGTA TTGCTGAAGT TGAACAGGCC TTCGTGGCGC AATATGCCTG TAAAGAGATT
TACAAGAAGC TCAAGAAAGC GCAACGCGCC GGTGAGTTAC CAGCCAAAGT GCCTAACTTG
GTGTTATTTG CTAAAGCGTT GGAGCAGGGC ACTGTGACTC AAGATGAGCA TCAAAAGCTG
TTACATGCTG ATAAGCTGCG CTTAGCGGCC ATCAATGTGA ATGATTTTGA AGCCTTATAA
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| Protein sequence | MLTIIIIALI AIIALFAVKS LRMQFITQPV FHFFKKVLPP LSDTEREAME AGDVWWEGEL
FRGNPNWNTL HSYGKPTLTA EEKDFIDNQV MTALKMIDDF DIVHNRKDLP PELWDYFKKE
GFFALIIPKK FGGRAFSAYA NSTIVSKLAS RSVSAAVTVM VPNSLGPGEL LTHYGTKEQK
ERWLPALAKG DEIPCFALTG PEAGSDAGAI PDVGIVCRGE FNGEEVLGLK LTWDKRYITL
APVATVLGLA FQMRDPDGLL GDKKNLGITC ALIPTDHPGV VIGRRHNPLN MAFMNGTTKG
EEVFIPLDWI IGGPEFAGRG WRMLVECLSA GRGISLPALA TASGHMATKT TTAYSYVRHQ
FGMAIGNFEG VQEALARIIA NTYQLEAARR LTTTGIDLKV KPSVVTAIAK FHMTELGRAV
MNDAMDIQSG KGIQLGPKNY LGHPYMSNPI SITVEGANIL TRSLMIFGQG ATRCHPYVLA
EMEAAAMENE HDALERFDSL LMGHMGYATR NAFSALFNAL TASRFGSAPV SGETKQYYKD
MSRISSALAL MTDISMLIMG GDLKRKEMLS ARMGDVLSQL YLGSATLKLF EDNGRQQDDL
PAVRYVMANR LHLAAKALEE VIRNFPNRPF AWLLRALIFP IGNHFNAPSD KMGTELVSGM
LKPSPARERI TFLCPEFEGD VGGIAEVEQA FVAQYACKEI YKKLKKAQRA GELPAKVPNL
VLFAKALEQG TVTQDEHQKL LHADKLRLAA INVNDFEAL
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