| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2046 |
|---|
| Symbol | |
|---|
| ID | 4252619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2433925 |
|---|
| End bp | 2435397 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638118662 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_734176 |
|---|
| Protein GI | 113970383 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.106062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.251216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAA CAACATCAGG CGCCAAAGCT TGTGACTTCG TACTCTTTGG TACTAAAGGC
GACTTGGCAC GACGCAAGTT GTTACCTTCT TTATACCAGC TAGATAAAGC TGAACTTCTG
GATAAAAACA CCAAAGTCAT TGGGGTTGCC AAAGATGAGT TCAGTCAGGA TGAATTTAGA
GAACTCGTCA TCCTTGCGTT AAAAACCTTC GTAAAAGAAC CGCTCTGCGA AGAGACTGTC
GAACGTTTCT TGTCCCGCTG CCATTATGTC GGCACGAATT TCACCGAATC TGCAGGCTAC
AGCGCCTTCC ATGAATTGCT CAAACCAGAA GAGCGCGTCA TGGTCAGTTA TTTTGCCACC
CCTCCTGCGA TTTTTGGTGA TATCTGCCGC TGTCTACACG AACAAAATCT TATCCATAGC
GATTCTCGCG TGGTACTCGA AAAGCCCATT GGCTCTGATC TCGCTTCTTC CCGCGTGATT
AACGATCAAG TTTCTGCCTA CTTCAAAGAA AACCAAGTTT ATCGTATCGA CCATTACTTA
GGTAAAGAGA CGGTCCAAAA CCTGATTGCG CTGCGTTTTG CTAACTCGTT ATTCGCGTCT
AAGTGGGACA ACCGGACCAT TGACCATGTC CAGATCACCG TTGCTGAAGA AGTGGGTATC
GAAGGCCGTT GGGGTTACTT CGATAAAGCC GGTCAGATGC GCGATATGAT CCAAAACCAC
TTACTGCAAG TGTTGACACT GGTTGCCATG GATCCTCCGG TTAACTTAGA TGCCGACAGT
ATTCGCGATG AAAAAGTGAA AGTACTGAAG TCGCTGCGCC CAATTAATGC CGACAATGTC
TATGAAAACA CTGTCCGTGG TCAGTACAGT GCCGGCTTCC TCAAGGGCAG TCCAGTTCCT
GGGTATTTAG AGGAAGAGGG CGCTAACCTT CAGTCCCACA CCGAAACCTT TGTGGCGCTG
CGTGTCGATA TCGACAACTG GCGTTGGGCG GGCGTGCCAT TTTATCTGCG TAGCGGTAAA
CGCATGCCGT TCAAGAGCTC TGAAATTGTG GTGTATTTTA AAAACCCACC CCACAACTTG
TATCGCTCAA GCTACCGTAA CTTGCCACCT AACAAGTTAA CCATCCGTCT GCAACCACAT
GAAGGGGTTG AGATCCAGAT GATGAACAAG GTGCCGGGGC TAGAGCAGAA GCAACGTTTA
CAAACCACTA AACTCGACTT GAGTTTCTCG GATACCTTTA AAAATGAGCG TATCGCCGAT
GCTTACGAGC GTCTGTTGCT CGAAGCCATG CTCGGTAACC AAGCACTGTT CGTTCGCCGT
GACGAAGTAG AGCAGGCTTG GACTTGGGTG GATGGCATCA TCCAATCATG GGAACAAAGT
AACGAGAAAC CGAAACCTTA TCCTGCGGGC ACTTGGGGAC CTGTAGCGTC GGTCGCGCTG
ATCACCAAAG ACGGCCGTTC GTGGGATGAA TAG
|
|---|
| Protein sequence | MGKTTSGAKA CDFVLFGTKG DLARRKLLPS LYQLDKAELL DKNTKVIGVA KDEFSQDEFR
ELVILALKTF VKEPLCEETV ERFLSRCHYV GTNFTESAGY SAFHELLKPE ERVMVSYFAT
PPAIFGDICR CLHEQNLIHS DSRVVLEKPI GSDLASSRVI NDQVSAYFKE NQVYRIDHYL
GKETVQNLIA LRFANSLFAS KWDNRTIDHV QITVAEEVGI EGRWGYFDKA GQMRDMIQNH
LLQVLTLVAM DPPVNLDADS IRDEKVKVLK SLRPINADNV YENTVRGQYS AGFLKGSPVP
GYLEEEGANL QSHTETFVAL RVDIDNWRWA GVPFYLRSGK RMPFKSSEIV VYFKNPPHNL
YRSSYRNLPP NKLTIRLQPH EGVEIQMMNK VPGLEQKQRL QTTKLDLSFS DTFKNERIAD
AYERLLLEAM LGNQALFVRR DEVEQAWTWV DGIIQSWEQS NEKPKPYPAG TWGPVASVAL
ITKDGRSWDE
|
|---|
| |