Gene Shewmr4_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2033 
Symbol 
ID4252606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2420917 
End bp2421717 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content48% 
IMG OID638118649 
Productalpha/beta hydrolase fold 
Protein accessionYP_734163 
Protein GI113970370 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000295645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000143979 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACCACA GCACAGGCGA TTCCATGAAT TTTGCATCCA CAGGTCAAGG AGAAGCAGTC 
CTCCTTATCC ACGGACTCTT TGGCAATTTA GATAATCTTA AGGGGCTAGG ACAAGTCCTC
GAAGCAAATC ATCAGGTTAT CCGCGTTGAT GTGCCTAATC ATGGTTTGAG TGAACATTGG
CAGGAGATGG ATTACCCAAG CCTAGCCGAG GCCATGGTGG CATTGTTAGA TGAACTTGAG
CTTGAGCGTG TACACATTGT TGGCCATTCC ATGGGCGGCA AAATCGCCAT GGCAACGGCC
CTTGCCTATC CAGAACGCAT CATCAGCATG GTGGCCGCCG ATATTGCCCC AGTAGCTTAT
CAGCCGCGCC ATGATGCGGT ATTTGCGGCA CTCGAAAGTT TGCCTCTTGA AGGCCACACC
GACCGCCGTT TTGCGTTATC GCATTTATTA GCAGGTGGCA TTGATGAACC GACCGCGCAG
TTTTTACTCA AAAACCTCCA GCGCACCGAC ACAGGCTTTC GTTGGAAGAT GAATCTTACA
GGCTTAAAAA GCTGTTATCC CAACATCATT GGTTGGCCTA ATGAAAACCA CAAATCGCAG
CAAGTCTATA ACGGACCGAG CCTTTTTATC CGTGGTGGTG AATCTAATTA TGTGACCGCC
GAACATCGCG ATGAGATCAT GCGTCAATTT CCCGCGGCGC AGGCCAAAAC ATTAGAAGGT
TGTGGCCATT GGCTACATGC TCAAAAACCA GCGGTGTTTA ATCGTATTGT GTCTGAATTT
ATTGACAAAC ACTCAGTGTA A
 
Protein sequence
MYHSTGDSMN FASTGQGEAV LLIHGLFGNL DNLKGLGQVL EANHQVIRVD VPNHGLSEHW 
QEMDYPSLAE AMVALLDELE LERVHIVGHS MGGKIAMATA LAYPERIISM VAADIAPVAY
QPRHDAVFAA LESLPLEGHT DRRFALSHLL AGGIDEPTAQ FLLKNLQRTD TGFRWKMNLT
GLKSCYPNII GWPNENHKSQ QVYNGPSLFI RGGESNYVTA EHRDEIMRQF PAAQAKTLEG
CGHWLHAQKP AVFNRIVSEF IDKHSV