Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2033 |
Symbol | |
ID | 4252606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2420917 |
End bp | 2421717 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118649 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_734163 |
Protein GI | 113970370 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000295645 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000143979 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACCACA GCACAGGCGA TTCCATGAAT TTTGCATCCA CAGGTCAAGG AGAAGCAGTC CTCCTTATCC ACGGACTCTT TGGCAATTTA GATAATCTTA AGGGGCTAGG ACAAGTCCTC GAAGCAAATC ATCAGGTTAT CCGCGTTGAT GTGCCTAATC ATGGTTTGAG TGAACATTGG CAGGAGATGG ATTACCCAAG CCTAGCCGAG GCCATGGTGG CATTGTTAGA TGAACTTGAG CTTGAGCGTG TACACATTGT TGGCCATTCC ATGGGCGGCA AAATCGCCAT GGCAACGGCC CTTGCCTATC CAGAACGCAT CATCAGCATG GTGGCCGCCG ATATTGCCCC AGTAGCTTAT CAGCCGCGCC ATGATGCGGT ATTTGCGGCA CTCGAAAGTT TGCCTCTTGA AGGCCACACC GACCGCCGTT TTGCGTTATC GCATTTATTA GCAGGTGGCA TTGATGAACC GACCGCGCAG TTTTTACTCA AAAACCTCCA GCGCACCGAC ACAGGCTTTC GTTGGAAGAT GAATCTTACA GGCTTAAAAA GCTGTTATCC CAACATCATT GGTTGGCCTA ATGAAAACCA CAAATCGCAG CAAGTCTATA ACGGACCGAG CCTTTTTATC CGTGGTGGTG AATCTAATTA TGTGACCGCC GAACATCGCG ATGAGATCAT GCGTCAATTT CCCGCGGCGC AGGCCAAAAC ATTAGAAGGT TGTGGCCATT GGCTACATGC TCAAAAACCA GCGGTGTTTA ATCGTATTGT GTCTGAATTT ATTGACAAAC ACTCAGTGTA A
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Protein sequence | MYHSTGDSMN FASTGQGEAV LLIHGLFGNL DNLKGLGQVL EANHQVIRVD VPNHGLSEHW QEMDYPSLAE AMVALLDELE LERVHIVGHS MGGKIAMATA LAYPERIISM VAADIAPVAY QPRHDAVFAA LESLPLEGHT DRRFALSHLL AGGIDEPTAQ FLLKNLQRTD TGFRWKMNLT GLKSCYPNII GWPNENHKSQ QVYNGPSLFI RGGESNYVTA EHRDEIMRQF PAAQAKTLEG CGHWLHAQKP AVFNRIVSEF IDKHSV
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