Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2031 |
Symbol | |
ID | 4252604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2418370 |
End bp | 2420022 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118647 |
Product | phosphoglucomutase |
Protein accession | YP_734161 |
Protein GI | 113970368 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0033] Phosphoglucomutase |
TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00697315 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000229027 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCAATAC ATCAACGGGC AGGACAAACC GCGAGTCAGA CGGATCTGGT GAATATTCCA AAGCTGATGA GCCATTATTA CAGCATCAAA CCTAATGTGG ATGCTGCCGA GCAACGTGTG ACGTTCGGGA CCTCGGGTCA CCGTGGAACG GCGTTTCAAG CAAGTTTTAA CCAAGACCAT ATTTGGGCGA TCACTCAGGC CGTGGTGGAT TATCGCCAAT CGGTGAATAT CGACGGCCCG CTATTTTTAG GTATCGATAC CCACGCCTTA TCTTATGCGG CTTACGTGTC GGCGATTGAA GTGTTAGCCG CCAATAAGGT GACTGTGCAT ATTCAGCAAA ATGATAGCTT TACCCCCACA CCTGTGGTGT CCCATGCCAT TATTTGCGCT AATCGTGAAG CGGCGCTGAG TGGCGCCGCG TTAAGCGATG GTTTGATTAT TACGCCATCC CATAATCCAC CGCAGGATGG TGGTATCAAG TACAATCCTC CCCATGGCGG CCCAGCCGAA GGCAATATCA CAGCGTGGAT TGAGTCCCGT GCTAATGATT ACCTGCGCGC AGGGCTTAAG GGCGTTAATA AGCTGGCTTA TGCCGATGCG TTAACTTCGG GTTATGTGCA TGCCATTGAT TTGATCACGC CCTATGTCGC GGATTTAGTC AATGTGGTCG ATATGCACGC TATCGCTAAG GCTAAGCTGA AATTGGGCGT TGACCCATTA GGCGGCTCGG GTATTCATTA TTGGGCACCG ATTGCCAAGC ACTATGGCAT TGATATCACC TTAGTTAACG ATAAGGTCGA CCCAAGTTTT AGCTTTATGT CGCTCGATAA AGACGGCAAG ATCCGTATGG ATTGCTCTTC TCCCTATGCG ATGGCAGGCT TACTTGCCCA CAAAGAATCC TTCGATTTAT GCGTTGGTAA CGATCCTGAC TACGACAGAC ACGGCATCGT GTGTCCGGGC ACAGGGCTGA TGGATCCCAA CCACTATTTA GCGGTAGCAA TTGATTATTT GCTGACCCAC AGACCCGAAT GGAGCGAGCA GTTAGCCATC GGCAAGACGC TGGTATCGAG CGCGCTTATC GATAAAATCT GTACCTTCCA TGGCAAAAAA TTACTCGAAG TCCCTGTCGG CTTTAAGTGG TTCGTCGATG GGTTAGCCGA GGCGACTATT GCCTTTGGTG GTGAGGAGAG TGCGGGCGCG GCGTTCCTGC GCCGTGATGG CACGACTTGG TGTACCGACA AAGACGGTTT TATTCTGGTA CTGCTAGCGG CCGAAATGCT CGCGGTTACT GGCAAGACGC CTGGGCAACG CCATCAAGAA TTAGTGGCGC AATTCGGTCA AAGCTTCTAC AAGCGTATCG ACAGCCCGAT TAGTCTTGAG AACAAAGCCA AATTTGCCAA GCTTAATGCC GAGACCTTAA ACGCTACTAT GCTGGCGGGT GAGAAGATTG ATGCCGTATT GACCCACGCC CCAGGTAACA ATGCCTCGAT AGGTGGCATT AAAGTGACGA CGGCCAATGG TTGGTTCGCG GCGCGGCCGT CGGGCACTGA GGCGTTATTT AAGATTTACG GTGAGAGCTT TATCAGTGAG CAGCATCTTG CCGATATCAT TAAGGACGCA CAGGCCTTGA TTGATAAGGC GCTTAGCGCC TGA
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Protein sequence | MAIHQRAGQT ASQTDLVNIP KLMSHYYSIK PNVDAAEQRV TFGTSGHRGT AFQASFNQDH IWAITQAVVD YRQSVNIDGP LFLGIDTHAL SYAAYVSAIE VLAANKVTVH IQQNDSFTPT PVVSHAIICA NREAALSGAA LSDGLIITPS HNPPQDGGIK YNPPHGGPAE GNITAWIESR ANDYLRAGLK GVNKLAYADA LTSGYVHAID LITPYVADLV NVVDMHAIAK AKLKLGVDPL GGSGIHYWAP IAKHYGIDIT LVNDKVDPSF SFMSLDKDGK IRMDCSSPYA MAGLLAHKES FDLCVGNDPD YDRHGIVCPG TGLMDPNHYL AVAIDYLLTH RPEWSEQLAI GKTLVSSALI DKICTFHGKK LLEVPVGFKW FVDGLAEATI AFGGEESAGA AFLRRDGTTW CTDKDGFILV LLAAEMLAVT GKTPGQRHQE LVAQFGQSFY KRIDSPISLE NKAKFAKLNA ETLNATMLAG EKIDAVLTHA PGNNASIGGI KVTTANGWFA ARPSGTEALF KIYGESFISE QHLADIIKDA QALIDKALSA
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