Gene Shewmr4_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2022 
Symbol 
ID4252595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2408270 
End bp2409160 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content46% 
IMG OID638118638 
Producthypothetical protein 
Protein accessionYP_734152 
Protein GI113970359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.38398e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.13318e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGACAAA ATCTAGTAAT AATTACATCA TTTACCCTCG CGATAAGCCT TTTCGGTTGT 
GATAATGGCC GAAATATCGA AACGATTTGT AAAAATAATC CTGAAATTTG TGCCGATTTG
CATAAGGATG GATGGTGTTT AACCGAGAAA ACCCTGCTGA TCCAGAGCCG ATTCGACCTA
TTAGACAACA AAAATCCTAC GGGTAAGCAA CTTTACCAAC AGTTAACTTA CCTTGAAGAT
TACAGCCGTT GTATTGAATT GGCCTCAGGG GTGCAACATA TCATCCATAC GAATCGCACA
GCTGACCGAG CAAGAGCCTT TCGCCTAAGT ACAGAAAACC TCAGCCGTCT ACAGGAAGAA
ACCCGCGAAC GCCAAGACCC CTTTATGTCT TACTATCAAT GGACACGTTT TGGTGACACC
GATGCCTTAA ACCGACTATT AGCGCAAGAA AATGCCGGTG AAGTCACAGA GCCTTTTCTC
CTTGCACAAA TCGCCACCTA TTACAGCAAT CGAAATGCCA TCAAAGCGCA ACAACTCTAT
CTTAAAGTGT TTGCAGAAAT TCAATATGCC GACTTTGATC CCAACTGGTT GCTTGGGCTC
GCCTCAGCCT ATCGTCAAAC CCAAGCGTTT GAAAAAACAT ATATGCTGAC CAAAGCCAAT
TTACTACTTA CGCAGCAGAA GTATTCTGAA GATAAGATGC TAGCCTTAAT CGGTGGCGAC
AAGACGCTTG CGGCCAAATT AGATCAATAC GCCCAGAACT TAATCGACGC GTTAGAAGAT
GGCCTCTATT CGACCAGTCC GGTTGCGCTC TGGCTTGCTC CGCCCCAGAC GGAGGTCACA
CCGCCTGCGG CAACAACAAC TGTCGAGCCA GAGAAGCCAA ATTCGCCTTA A
 
Protein sequence
MRQNLVIITS FTLAISLFGC DNGRNIETIC KNNPEICADL HKDGWCLTEK TLLIQSRFDL 
LDNKNPTGKQ LYQQLTYLED YSRCIELASG VQHIIHTNRT ADRARAFRLS TENLSRLQEE
TRERQDPFMS YYQWTRFGDT DALNRLLAQE NAGEVTEPFL LAQIATYYSN RNAIKAQQLY
LKVFAEIQYA DFDPNWLLGL ASAYRQTQAF EKTYMLTKAN LLLTQQKYSE DKMLALIGGD
KTLAAKLDQY AQNLIDALED GLYSTSPVAL WLAPPQTEVT PPAATTTVEP EKPNSP