Gene Shewmr4_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2016 
Symbol 
ID4252589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2400672 
End bp2401640 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content48% 
IMG OID638118629 
ProductC32 tRNA thiolase 
Protein accessionYP_734146 
Protein GI113970353 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.99451e-09 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTGGAAG CTATGTCTGA AGTTACGGCG AGTCAAATGC CTGAAGAATT ATCAAAAAAA 
CAAATTACCC GTCTGAATAA ATTACAGAAG CGTCTGCGCC GTGAAGTGGG TAGTGCCATC
GCCGATTACA ACATGATTGA AGATGGCGAC CGAGTCATGT GCTGCTTAAG TGGCGGTAAA
GACAGTTACG CCATGCTGGA TATTCTGCTT AATCTACAGC AGCGCGCGCC CGTACAGTTC
GAAATTATTG CCGTTAATTT AGATCAAAAA CAGCCGGGTT TCCCTGAACA CGTACTGCCA
GCCTATTTAG ACAGCCTAAA TATTCCTTAT CACATCCTCG AGAAAGACAC TTACTCGATT
GTGAAAGAAA AGATCCCTGA AGGCAAAACC ACTTGCTCGC TGTGCTCTCG CCTGCGTCGC
GGTACACTCT ATGGCTTTGC CCAGCGCATT GGCGCAACCA AAATCGCCCT AGGCCACCAC
AGAGACGATA TTATTGAGAC CATGTTCCTC AACATGTTCT ACGGCGGCAA GATGAAAGCC
ATGCCACCTA AGTTGCTCTC GGACGACGGC GCTAACGTGG TTATTCGTCC ACTCGCCTAT
TGCCGCGAAA AGGATTTAGA AGAATATGCG GAATTGAAAA AATTCCCCAT CATTCCCTGT
AACCTTTGTG GCTCGCAGGA AAACCTCAAG CGCCAAGCAG TGAAAGACAT GCTCAATCAG
TGGGATAGAC TCTACCCAGG CCGTATTGAA ACCATTTTTA CCGCCATGCA AAACACCGCC
CCTTCACAGG GTGTTGACCG TGAGCAGTTT GACTTTGTGT CGTTGAAACG CGATCCCAAC
GCGCCAATGA AGGGTGATGT GGCCGAAGCC GATTTACCCG CATTTGACTT TTTGGATATC
GCCAACAGCG GCCATATCGA TTTAGATGCG GCAAAACGCA TCAATATCGT CAACGTTTAC
GAAGCGTAA
 
Protein sequence
MLEAMSEVTA SQMPEELSKK QITRLNKLQK RLRREVGSAI ADYNMIEDGD RVMCCLSGGK 
DSYAMLDILL NLQQRAPVQF EIIAVNLDQK QPGFPEHVLP AYLDSLNIPY HILEKDTYSI
VKEKIPEGKT TCSLCSRLRR GTLYGFAQRI GATKIALGHH RDDIIETMFL NMFYGGKMKA
MPPKLLSDDG ANVVIRPLAY CREKDLEEYA ELKKFPIIPC NLCGSQENLK RQAVKDMLNQ
WDRLYPGRIE TIFTAMQNTA PSQGVDREQF DFVSLKRDPN APMKGDVAEA DLPAFDFLDI
ANSGHIDLDA AKRINIVNVY EA