| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2015 |
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| Symbol | |
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| ID | 4252588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2399662 |
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| End bp | 2400594 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118628 |
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| Product | universal stress protein UspE |
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| Protein accession | YP_734145 |
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| Protein GI | 113970352 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000455059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGGATT ATCAAAAAAT ACTGGTAGTA GTCGACCCTA CGACAGAGCA TCAAGTTGCA
CTCGCCCGAG CGGTGACCTT GGCCAGTAAA AGTAACGCCC ATGTGACTGT GTTTCTCTCT
ATTTTTGACT TCTCCTACGA AATGACATCG ATTCTATCGA GCCAAGAGCG CGAAGCCATG
CGCCAAGGTG TGATTGATCA GCGTCTGGCG TGGATCCAAG ATCTACTGAC CGCCTATAAC
CACCTGCAAC TCGATATTGA TACTCAAGTT ATTTGGCACA ATCGCCCATT TGAAAGCATC
ATCAACCATG CGATTGCAGG GCAATATGAT TTGATCGTCA AAGGCACCCA CGCCCACGAC
AAGTTAAAGG CCGTTATTTT TACTCCAACC GATTGGCATT TAATGCGTAA AGCGCCTGTG
CCCGTGTTGA TGGTTAAAGA TCATGATTGG CCTGAAGCGG GTAAGATCCT CTGCGCCGTC
AACGTGGCAA CCGAAGACAC CGATCATCAG ATGCTAAACG GCAAGATTAT CGAACATGCC
AAGGATTTAG CCGCAAAATT TGCCGCCGAA GTGCACTTAG TCAATGGTTA TCCCGGCACA
CCGGTGAATC TTGCCATTGA ACTGCCTGAT TTCGATGCAC AAACCTATAA CGACACCATT
CGCATGCAAC ATGAGCAACG AGTGCAATAC CTTGCCAATG CCTATGGTAT CGATACCCTG
CACTGCCATG TGAAAGAAGG CTTGCCAGAG GATGTGATCC CTGAGCTTGC CGAGCAACTC
GATGCCGAGC TGGTCATTTT AGGCACCGTC GGTCGGACTG GATTCTCGGC GGCGCTTATC
GGCAATACCG CAGAGCATGT GATTGATAGC ATTAACTGTG ATTTATTAGC CATCAAACCC
GATGGTTATA AATCGCCGCT TGAAGAGGCA TAA
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| Protein sequence | MKDYQKILVV VDPTTEHQVA LARAVTLASK SNAHVTVFLS IFDFSYEMTS ILSSQEREAM
RQGVIDQRLA WIQDLLTAYN HLQLDIDTQV IWHNRPFESI INHAIAGQYD LIVKGTHAHD
KLKAVIFTPT DWHLMRKAPV PVLMVKDHDW PEAGKILCAV NVATEDTDHQ MLNGKIIEHA
KDLAAKFAAE VHLVNGYPGT PVNLAIELPD FDAQTYNDTI RMQHEQRVQY LANAYGIDTL
HCHVKEGLPE DVIPELAEQL DAELVILGTV GRTGFSAALI GNTAEHVIDS INCDLLAIKP
DGYKSPLEEA
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