Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2013 |
Symbol | |
ID | 4252586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2398019 |
End bp | 2398711 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118626 |
Product | hypothetical protein |
Protein accession | YP_734143 |
Protein GI | 113970350 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000381426 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGATTGAAT ATAACGTCAC AGGGGCATTT CTGGTGGGAT TAATGGGCGC AGCCCACTGC TTTGGTATGT GTGGCGGCCT CGTTGGCGCC TTTTCCTCCC AACTGCCGAA TCCTAAACAG GGTAATCACT TAGCCCATCA ACTCACCTAC TTATTAAGCT ATAACCTCGG CCGGATTTTA AGTTATACCC TCGCAGGTGC CTTAGTCGGC GGTTCGTCGG CCATGCTTGG GCACTTATTC GAACTCGACA GTTACCTGTT AATCCTAAGG ATCATTGCTG GCGTGATGAT GATTGCAACA GGGCTTTACA TTGCAAAAAT CTGGGTGGGT ATAGTGCAGA TTGAGCGCCT TGGCCAAGTG TTATGGCGCT ACCTTAAACC TTTAGCCCAA CGCCTCGTGC CCATCACTAC GCCCATGCAG GCCATCACCG CTGGACTCAT TTGGGGCTGG CTACCCTGCG GCTTGGTCTA TAGCACCTTA ACCTGGTCGG TGGCGGCAGG CTCTGCCAGC CAAGGCGCCT TGATTATGTT CGCCTTTGGA TTAGGGACAC TGCCAGCGTT ACTGAGTGCC GGAGTGGCGG CCAAACGTTT AGCCAATTGG GTACAGCAAA AAACCGTTAG ATTATTGAGT GGCTTACTTT TAATTGCCTT TGGCGCACAA ACTTTATATA TCGCCCTGTC GCAGCTAAAC TAG
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Protein sequence | MIEYNVTGAF LVGLMGAAHC FGMCGGLVGA FSSQLPNPKQ GNHLAHQLTY LLSYNLGRIL SYTLAGALVG GSSAMLGHLF ELDSYLLILR IIAGVMMIAT GLYIAKIWVG IVQIERLGQV LWRYLKPLAQ RLVPITTPMQ AITAGLIWGW LPCGLVYSTL TWSVAAGSAS QGALIMFAFG LGTLPALLSA GVAAKRLANW VQQKTVRLLS GLLLIAFGAQ TLYIALSQLN
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