Gene Shewmr4_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2012 
Symbol 
ID4252585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2397810 
End bp2398010 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content45% 
IMG OID638118625 
Productcytochrome oxidase maturation protein, cbb3-type 
Protein accessionYP_734142 
Protein GI113970349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3197] Uncharacterized protein, possibly involved in nitrogen fixation 
TIGRFAM ID[TIGR00847] cytochrome oxidase maturation protein, cbb3-type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.91515e-09 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCATCA TTTATGTACT AATCCCTATC GCGATGATCT TTGTGTTGAT CGCCGTAGCC 
GTGTTCTTTT GGGCGGTAAA ATCCGAACAA TTCGATGACT TAGACCGTCA AAGTGTGTCG
ATTCTTTTCG ATGAGGATGC AGACAAACCG ACTCAAGCCA ATCCATCGTC ACAGGCACAA
GATAAAGGCA TGCCTCAGTG A
 
Protein sequence
MSIIYVLIPI AMIFVLIAVA VFFWAVKSEQ FDDLDRQSVS ILFDEDADKP TQANPSSQAQ 
DKGMPQ