| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2011 |
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| Symbol | |
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| ID | 4252584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2395378 |
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| End bp | 2397789 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118624 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_734141 |
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| Protein GI | 113970348 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000954051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATATTG CTATGACACA TCCAAGTTGT TTTCACTGTA ATGAGCCCGT GCTCACTGGG
ACTCAGTTTG TCACCCGCAT TAATGACCGC GATGAACTCA TGTGTTGCCC AGGCTGCCAA
GCGGTATCTC AAGCCATTGT GGATGCAGGC TTATTAAGCT ATTACAAGTT TCGAACCGAA
CCTGGCAGTA AACAGACGGC ACTGGTACCA GATGAATTAA ATCAGTTTAG TGCCTACGAT
TTGCCCGAAG TACAGCAGGA CTTTGTCCAC TCGGAGGAAA AGAGTGACTC TGTGTCGCTG
TCCATCGACG GCATTACCTG TGCGGCCTGC GCTTGGTTAA TCGAACATAA AGTGAAACAA
CTGCCTGGCG TCAGCCAAGT GATGGTCAAC TCCACCACCC AAAGGGCGAT GATCAGCTGG
GATAAACAGC AAGTTAAACT CAGTGATATT CTTGGGCAAA TTAGCCGTAT TGGTTATCAA
GCCGCGCCCT ATCAAGTGGA TGAGCAAGAA CTGACCGCCA AGCAAAATAG CCGCAAATTT
TTACTGCGCT TAGGCTTGGC GGGCTTTGCT ACCATGCAAG TGATGATGTT CGCCCTCGCC
CTCTATACCG GTTACTTTAC CGATTTGGAT GTGCAATATC GGGATTATTT CCGCTGGGTG
AGCATGATTT TTGCCACACC CGTGGTGCTT TACTCGGCGC AGCCCTTCTA TTTCAGCGCC
ATTCGCACCC TGCTCAGTGG CAAACTCAAT ATGGATGTGT CGGTCTCTAT CGCCATTGGC
GGCGCCTATA TCGCCAGTTG CTTTGCGACG GTTAACGGCA CGGGCGAAGT CTATTTTGAA
TCCGTCTCCA TGTTTACCTT CTTCCTGCTG CTGGGGCGTT ATTTCGAGCA GAAGGCAAGA
CAAAAAGCTT CCGTTAGCTC CAGTAATCTC CATAAATTAG TGCCGTTAAC GGCGCATTTG
GTTACGGCCC AAGGGCAAGA AGAGATCCCC GCGAAAAAAT TACGTCTCGG GGACATTATC
CTAATTAAAC CCGGCGAAAT GGTCGCCGCC GACGGAATCG TTGTTGACGG CCACACCAGC
ATCAATGAAG CCATGCTCAC CGGTGAGCAA ATGCCGATTG AAAAGCCCGT CGATAGCCAA
GTATTTGCTG GCACCATTAA CCTAGACCAA CCCATTAAGG TTAAAGTGAC CGCCCTTGGG
CAAGACCAAT TGGTTGCCGA AATTATTCGT CTGCAGGAAT TAGCCTCAAA CACTAAACCT
GCCGTCGCTA TGTTGGCTGA TAAATTGTCG CGTTATTTCT CAGGCACTAT CTTATCCATT
GCGACGATCA CCTATCTGGT GTGGCTCCAA ATCTCCCCCG AAGATGCATT TTGGGTCACC
TTGTCGGTAT TAGTGGCAAC TTGCCCTTGC GCGCTTGCGC TAGCCACCCC TACAGCCGTC
ACCTGCGCGA CCGCGATTTT TACTCGCCTT GGGATTATTA CCCGCAAAGC CGGCGTCTTT
GAAAAACTGC CACAAATCAA ACATGTGGTA TTTGATAAAA CTGGCACCCT CACCTGCGGC
ACCCTATCAA TTGCCAAGGT TGAATGCCAT AGCGATATCG AGAAAGAACA GGTACTGGCA
ATCGCAGCAG CGCTAGAATC AGGCTCACGC CACCCTATCG CTGCGGCCTT TGCCAGCTTT
GCCCAAGTCG ATGTTGTGGC CGAGCAAGTT CACCATGAAG TGGGTTTTGG GGTGAAAGGC
TTGATTAATG GCACCGAGTA CCGCATTGGT AATTCAAGTT TTACGGGGGC CGCCGCCGAG
CCCAAACTTG CAAACCAGCT GATTTGGCTC GCCCGAAGTC AGAATGGCCA GCTTGAAGTC
ATCGCCACGA TTGAGATCCA AGATAATATC CGTGTCGATA GCAAAGAAAC CGTCGATATT
TTGAAGCAAC AAGGTTGCCA GGTCAGTATC GCCAGTGGCG ATAGCTCAGG GCATGTGCAT
CAATTGGCGA AAGACCTCGG CATTAGCGAT GTCCACAGTG GACTGACTCC AGCCGATAAA
CTGGCACTGG TGACCAAACT GCAGCAATCG ACACCAGTTG CCATGTTCGG CGATGGCATC
AACGATGCGC CCGTGCTGGC GGGCGCCGAC TTATCCGTGG CTATGGGCAG CGGTAGTGCG
ATAGCCAAAA ATAGCGCCGA TCTTATTCTG CTTGGCGATC ACCTCTCCCG CTTCACCCAA
GCGGTTAAGG TTGCTAAACT GACCACACAA ATTATTCGTC AAAACCTCGC TTGGGCCTTA
AGCTATAACG CGCTTATTTT ACCGCTGGCG GTAACTGGGC ATGTTGCGCC TTATATTGCC
GCCCTTGGTA TGTCGGCAAG CTCTTTGATT GTTGTGGGTA ACAGTTTGAG ATTATTACGA
ATTAAATTAT AA
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| Protein sequence | MNIAMTHPSC FHCNEPVLTG TQFVTRINDR DELMCCPGCQ AVSQAIVDAG LLSYYKFRTE
PGSKQTALVP DELNQFSAYD LPEVQQDFVH SEEKSDSVSL SIDGITCAAC AWLIEHKVKQ
LPGVSQVMVN STTQRAMISW DKQQVKLSDI LGQISRIGYQ AAPYQVDEQE LTAKQNSRKF
LLRLGLAGFA TMQVMMFALA LYTGYFTDLD VQYRDYFRWV SMIFATPVVL YSAQPFYFSA
IRTLLSGKLN MDVSVSIAIG GAYIASCFAT VNGTGEVYFE SVSMFTFFLL LGRYFEQKAR
QKASVSSSNL HKLVPLTAHL VTAQGQEEIP AKKLRLGDII LIKPGEMVAA DGIVVDGHTS
INEAMLTGEQ MPIEKPVDSQ VFAGTINLDQ PIKVKVTALG QDQLVAEIIR LQELASNTKP
AVAMLADKLS RYFSGTILSI ATITYLVWLQ ISPEDAFWVT LSVLVATCPC ALALATPTAV
TCATAIFTRL GIITRKAGVF EKLPQIKHVV FDKTGTLTCG TLSIAKVECH SDIEKEQVLA
IAAALESGSR HPIAAAFASF AQVDVVAEQV HHEVGFGVKG LINGTEYRIG NSSFTGAAAE
PKLANQLIWL ARSQNGQLEV IATIEIQDNI RVDSKETVDI LKQQGCQVSI ASGDSSGHVH
QLAKDLGISD VHSGLTPADK LALVTKLQQS TPVAMFGDGI NDAPVLAGAD LSVAMGSGSA
IAKNSADLIL LGDHLSRFTQ AVKVAKLTTQ IIRQNLAWAL SYNALILPLA VTGHVAPYIA
ALGMSASSLI VVGNSLRLLR IKL
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