Gene Shewmr4_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2010 
Symbol 
ID4252583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2394888 
End bp2395367 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content45% 
IMG OID638118623 
Producthypothetical protein 
Protein accessionYP_734140 
Protein GI113970347 
COG category[S] Function unknown 
COG ID[COG3198] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.7151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000218476 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAC AACAACCCTG GTATAAGCAG TTTTGGCCTT GGTTTTTAAT TATTCTTCCT 
TTGTGTGCCG TCGTCGCAAG TTTTACCACG CTAAAAATTG CCCTCTCTAA CTCTGACTCT
CTGGTCGCCG AGGATTATTA CAAAGAAGGC AAAGCCATCA ACATGGACTT GAGTAAAGTC
AAATATGCCA AGCAGCTTGG CATGCAATGG CAACTCGAAC AAAATCACCA CGAAGTGCTA
TTCACCCAAC ACGGTGGACC TGCCTATCAA GCCGCGTTAA AAGTCGAATT TTATCACCCA
ACAATTGCCG AAAAAGACAT CAAGATGACG GTAACGGCCG ATGCTAACCA TGTGTATCGC
ATTACCCTGC CCGATGTATT AACGGGTGCT TGGGAAGTCC GCCTCGAAGG TTTTGACGGT
AAATGGCGTA TTCATCAACG TGTCGAACTC AAAGACAACG TCCAATTGTG GTTGAACTAA
 
Protein sequence
MSEQQPWYKQ FWPWFLIILP LCAVVASFTT LKIALSNSDS LVAEDYYKEG KAINMDLSKV 
KYAKQLGMQW QLEQNHHEVL FTQHGGPAYQ AALKVEFYHP TIAEKDIKMT VTADANHVYR
ITLPDVLTGA WEVRLEGFDG KWRIHQRVEL KDNVQLWLN