Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2006 |
Symbol | |
ID | 4252579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2391546 |
End bp | 2392982 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118619 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_734136 |
Protein GI | 113970343 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00103508 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000337866 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGAACC ATTCCCAGCC AACAGGCGCT GATTACAATT ACACCATTGT CCGCCAATTT GCCTTAACCA CAGTTTTGTG GGGTATTGTT GGTATGTCAG TCGGTGTATT AATTGCGGCT CAGTTAATCT GGCCACATCT GAACTTTGAT ACTCCTTGGT TTACGTATAG TCGCTTGCGA CCATTACATA CCAATGCGGT AATCTTCGCG TTCGGAACAT CAGCCCTCTT TGCAACATCC TATTATGTCG TACAACGCAC CTGTCAAACC CGACTATTTG CACCTAAATT AGCTGCATTT ACGTTTTGGG GATGGCAAGC CATCATTCTG TCAGCAGCCA TCACTCTGCC AATGGGTTAC ACCAGCGGTA AAGAATATGC TGAATTAGAA TGGCCAATCG ATATTGCCAT CACCATCGTT TGGGTATCCT ATGCAATAGT GTTCTTCGGC ACTATTATCA AACGAACAAC ATCGCATATT TACGTAGCGA ACTGGTTCTT TGGTGCATTT ATCATTACGG TTGCCGTGCT TCACATCGTG AACTCAATGG CCGTTCCTGT TAGCTTGTTC AAGTCATACT CTATGTACAG TGGCGCGGTC GATGCCATGG TGCAATGGTG GTATGGTCAC AACGCGGTAG GCTTCCTGTT AACCGCAGGC TTCTTAGGTA TGATGTACTA CTTCGTTCCT AAGCAAGCGG GTCGTCCTGT TTACTCATAT CGTCTGTCGA TTGTGCACTT CTGGGCACTG ATCGCACTGT ACATTTGGGC AGGTCCTCAC CACTTACACT ACACTGCCCT GCCAGACTGG ACTCAGTCTT TAGGTATGGT GATGTCACTG ATCCTGTTCG CACCATCTTG GGGCGGTATG ATCAACGGTA TCATGACCTT ATCTGGCGCA TGGCATAAAC TCCGTACTGA CCCAGTACTG CGTTTCTTAG TGGTTTCTCT GTCTTTCTAC GGTATGTCGA CCTTCGAAGG TCCGATGATG GCCATCAAGA CAGTTAACGC TTTATCTCAC TACACAGACT GGACTGTCGG TCACGTTCAC TCAGGCGCGC TAGGCTGGGT TGCAATGGTG TCTATCGGTT CTCTGTATCA CTTGATCCCA GTACTGTTCG GCCACGGCCG TATGTACAGC ATCAAGTTAG TCAACGTGCA TTTCTGGTTA GCGACTATCG GTACCGTACT TTACATCGTG TCTATGTGGA TTTCGGGTGT AATGCAAGGT CTGATGTGGC GTGCAGTTAA CGCTGACGGT ACTTTGACTT ATAGCTTTGT TGAAAGTCTG GAAGCTTCTT ATCCTTTCTA CTTCGTACGT TTCCTCGGCG GTTGTTTCTT CTTAACCGGT ATGCTGATCA TGGCATACAA CGTGATCCGT ACTGTGAAAG CCTCTAAAGA TTCATTGCCA GCACTGGCTG AAGCAAAAGC GGCTTAA
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Protein sequence | MMNHSQPTGA DYNYTIVRQF ALTTVLWGIV GMSVGVLIAA QLIWPHLNFD TPWFTYSRLR PLHTNAVIFA FGTSALFATS YYVVQRTCQT RLFAPKLAAF TFWGWQAIIL SAAITLPMGY TSGKEYAELE WPIDIAITIV WVSYAIVFFG TIIKRTTSHI YVANWFFGAF IITVAVLHIV NSMAVPVSLF KSYSMYSGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY RLSIVHFWAL IALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA WHKLRTDPVL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTVGHVH SGALGWVAMV SIGSLYHLIP VLFGHGRMYS IKLVNVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNADG TLTYSFVESL EASYPFYFVR FLGGCFFLTG MLIMAYNVIR TVKASKDSLP ALAEAKAA
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