Gene Shewmr4_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2000 
Symbol 
ID4252573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2385038 
End bp2385889 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content51% 
IMG OID638118613 
Producthypothetical protein 
Protein accessionYP_734130 
Protein GI113970337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00389336 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.77823e-09 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGTTT TTCGTCTATT TACGCTGACA ACGCTCACCA TGTTGGCCTT TGCCTGTAAC 
TCGATACTTT GCCGGCTCGC GTTAAAGGAT GGCAGTATCG ATGCGGGCAG CTTTACCCTG
ATCCGGTTGT TATCGGGTGC CATCATGCTC TGGCTATTAA GCCTCAACAA ACCTGCGCAG
GAGGCCAAGG GCCATTGGGG CTCAGCCTTG GCATTGTTTG TCTACGCAGC GGGATTTTCC
TATGCCTATA TCAATATGAC GGCCTCAATG GGCGCGCTGT TACTCTTTGG CGCCGTACAA
GCCACCATGA TTGGCTATGG GCTTTACCGA AAAGAAACCT TTAATACCAG ACAATGGCTT
GGATTAGCCT GCGCCGCTGC CGGTTTGATT TTTCTGCTGT TACCTGGGCT GTCGGCGCCG
CCGCTACTGA GTTCATTGCT GATGATAAGC GCTGGAGTCG CTTGGGGGAT TTATTCGATT
AAGGGCAGGG GAGCCAAGCA TCCCATTCCA GTCAGTGCAG GCAACTTTAT CCGCACTGTG
CCGATAGCAC TGTTATTACT GTTAGTAGTT CGAGATCCCT TAGCGGTAAG TCAGATGGGG
ATTATCTATG CGTTAGCTTC GGGCGCTATC GCTTCAGGCT TAGGTTATGC GATTTGGTAT
TCCATTTTAC CTTTATTGTC ATCCACCTAC GCCGCCACTG TACAATTGAG TGTGCCGTTA
ATTGCCGCGG TTGGCGGGGT GCTATTGCTG GATGAACCTC TAAGCCTTCG ATTATTGCTA
GCCTCCGGTG CCATCCTCGG TGGCATTGCA CTGGTTGTCC TCAGCAAATC TGCACCACAA
AATAAAAGCT AA
 
Protein sequence
MTVFRLFTLT TLTMLAFACN SILCRLALKD GSIDAGSFTL IRLLSGAIML WLLSLNKPAQ 
EAKGHWGSAL ALFVYAAGFS YAYINMTASM GALLLFGAVQ ATMIGYGLYR KETFNTRQWL
GLACAAAGLI FLLLPGLSAP PLLSSLLMIS AGVAWGIYSI KGRGAKHPIP VSAGNFIRTV
PIALLLLLVV RDPLAVSQMG IIYALASGAI ASGLGYAIWY SILPLLSSTY AATVQLSVPL
IAAVGGVLLL DEPLSLRLLL ASGAILGGIA LVVLSKSAPQ NKS