Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1991 |
Symbol | |
ID | 4252564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2367618 |
End bp | 2368619 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118604 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_734121 |
Protein GI | 113970328 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.535361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0025818 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAAGAG CAACAAACAG CCCCCTAGTC GAGCAGCGCG CCGATCCCTT TGTGTACCTA CATAGCGACG GTTATTACTA CTTTACGGGC TCTGTTCCGA CCTACGATCG GATTGAACTG CGTAAATCCA AGACCTTAGA CGGCTTAAAA GACGCACAAA CCTTCGATAT CTGGTTTAAA CACCAAAGCG GCCCAATGAG CCGCCACGTA TGGGCGCCCG AGATCCATTA TCTCGACGGC AAATGGTATA TCTACTTTGC GGCAAGTGAA GAGGAAAATA TTTGGGCCTT ACGCCCCTAT GTGCTTGAGT GTCTAGGACA AGATCCATTA AATGATGAAT GGATTGAACT TGGCATGATG CAGGCGGCTG AGGGTGATAA TAAGTCCTTT ATCGACTTTT CCTTAGATGC GACCATTTTC GAAAACAACG GTAAGCGTTA CTTCTGCTGG GCGGAGAAAA CCGGTGGACA ATTTGCGGCA TCCAACCTGT ATCTTGCGGA AATGGCATCG CCCATCAAGT TAAAGACGGC GCAATTTATG CTCACCACCC CAGATTATGA TTGGGAGCGC GTCGATTTTT GGGTTAACGA AGGGCCTGCA GTACTTAAAC ACCAAGGTAA AATCTTCATT ACTTTCTCAG CCAGCGCCAC AGGTGCTTGT TATTGCATGG GTTATATGGA GGCCGATGAG CATGCTGATC TGCTCGATCG TAACTCATGG AAGAAAACCC GCCAGCCAGT GCTGTGCACA GATGTCGACA AGCAAATATT CGGCCCTGGT CATAACAGTT TCACCGTGGC AGAAGATGGC GTGACGCCCA TCTGTGTTTA CCATGCCCGT GATTATGAAC ATGCGGTGGG CGATCCTAGC GTGGTGCCAA AGACAGATAC CCGTCCATTA GCGCAAATCA TTAAAGATCC ACTCTATGAT CCCAATCGCC ATGCGCGGAC GTTAGCGGTG TCATTTGATG AGAGCGGGCG CCCCTTGTTC AACCTCTACT AA
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Protein sequence | MIRATNSPLV EQRADPFVYL HSDGYYYFTG SVPTYDRIEL RKSKTLDGLK DAQTFDIWFK HQSGPMSRHV WAPEIHYLDG KWYIYFAASE EENIWALRPY VLECLGQDPL NDEWIELGMM QAAEGDNKSF IDFSLDATIF ENNGKRYFCW AEKTGGQFAA SNLYLAEMAS PIKLKTAQFM LTTPDYDWER VDFWVNEGPA VLKHQGKIFI TFSASATGAC YCMGYMEADE HADLLDRNSW KKTRQPVLCT DVDKQIFGPG HNSFTVAEDG VTPICVYHAR DYEHAVGDPS VVPKTDTRPL AQIIKDPLYD PNRHARTLAV SFDESGRPLF NLY
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