| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1987 |
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| Symbol | |
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| ID | 4252560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2362770 |
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| End bp | 2364272 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118600 |
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| Product | ABC transporter related |
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| Protein accession | YP_734117 |
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| Protein GI | 113970324 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.063033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTA TTTTAGAACT CAAGCAGATC AGTAAGCATT ATCCGGGCGT TAAAGCCCTT
GAGGATGTGA GCTTACGGTT ATTTGCAGGG GAAGTTCACG CCCTATTGGG CGAAAACGGT
GCGGGTAAAT CAACCCTGGT GAAAGTGATG ACAGGCGCCC AGTCGAAAGA CATGGGCGAC
ATCCTTTTCC TCGGTGAGCC GCAACACTTC AACACACCAA TGGACGCGCA AAAGGCGGGG
ATCAGCACGG TTTATCAAGA GGTGAACTTA GTGCCTAACC TGACCGTGGC ACAAAACCTG
TTCCTCGGTT ACGAACCGCG CCGCCTTGGG CTGATCCATT TTAAAAAAAT GTATGCCGAC
GCGCGGGCCG TGTTAACCCA GTTCAAACTG GATATCGATG TTAGCGCGCC GCTGTCAGAT
TATTCCATCG CGGTGCAGCA ACTGATCGCC ATCGCCCGCG GCGTAGCCAT GTCGGCCAAG
GTATTAGTGC TCGATGAGCC TACCGCGAGC TTAGATGCCA AAGAAGTGCA AGTGCTGTTT
GGGATCTTAA ACCAGCTCAA AGCCAAGGGC GTGGCTATTG TCTTTATCAC TCACTTCCTC
GATCAGGTTT ATCAGATAAG CGATCGCATT ACCGTGTTAC GTAACGGGCA GTTTATCGGC
GAATATCTGA CGGCAGAACT GCCACAACCT AAGTTGATTG AAGCCATGCT CGGGCGTTCT
CTGCAGGAGC AATTGGTTGA TAAACAGGAA AAGGAGCGCA CAGTCACCCG CGCTGAGGCT
GTGCTCTTGT CCCTCAAAGA TGTGTCGGTA AAAGGTTCAA TCCAATCGAT GAATCTCACC
GTGCCAAAGG GGCAGGCAGT TGGACTTGCG GGGCTGCTAG GCTCTGGGCG CAGCGAAGTC
TGCAACGCCG TATTTGGGCT GGACTTGGTC GATAGCGGCA GTATCCATTT AGCTGGGCAG
AAATTGAATC TGTCACAACC CGTGGATGCG ATCAGCGCCG GGATCGCCCT GTGCCCGGAA
GATCGCAAGA TTGACGGCAT CATCGGCCCT TTATCGATTC GTGAAAATAT TATCCTCGCG
CTGCAGGCAC GTATCGGTTG GTGGCGGTAT TTATCTAAAG CTCGGCAACA GGAAATTGCC
CAGTTCTTTA TCGATAAATT ACAGATTGCA ACCCCAGATG CGGATAAACC CATAGAGCAA
TTGAGTGGCG GTAATCAGCA GAAGGTGATC CTCGCGCGTT GGTTAGCCAT CGAGCCGATT
TTATTGGTAC TGGATGAGCC TACCCGCGGC ATCGATATTG GCGCCCACGC AGAAATCGTC
AAGCTTATCA GAACCTTGTG TGATGAAGGC ATGTCACTGC TGGTTGCATC GTCTGAGCTC
GATGAGCTCG TGGCCTTTTC GAATAAAGTC GTGGTATTAC GCGACAGATA TGCAGTACGT
GAACTTTCAG GAGCGGAATT AACCTCGCAA CACGTAATGC AAGCGATTGC GGAGGGAAAA
TGA
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| Protein sequence | MSLILELKQI SKHYPGVKAL EDVSLRLFAG EVHALLGENG AGKSTLVKVM TGAQSKDMGD
ILFLGEPQHF NTPMDAQKAG ISTVYQEVNL VPNLTVAQNL FLGYEPRRLG LIHFKKMYAD
ARAVLTQFKL DIDVSAPLSD YSIAVQQLIA IARGVAMSAK VLVLDEPTAS LDAKEVQVLF
GILNQLKAKG VAIVFITHFL DQVYQISDRI TVLRNGQFIG EYLTAELPQP KLIEAMLGRS
LQEQLVDKQE KERTVTRAEA VLLSLKDVSV KGSIQSMNLT VPKGQAVGLA GLLGSGRSEV
CNAVFGLDLV DSGSIHLAGQ KLNLSQPVDA ISAGIALCPE DRKIDGIIGP LSIRENIILA
LQARIGWWRY LSKARQQEIA QFFIDKLQIA TPDADKPIEQ LSGGNQQKVI LARWLAIEPI
LLVLDEPTRG IDIGAHAEIV KLIRTLCDEG MSLLVASSEL DELVAFSNKV VVLRDRYAVR
ELSGAELTSQ HVMQAIAEGK
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