| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1979 |
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| Symbol | |
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| ID | 4252552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2353647 |
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| End bp | 2355149 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118592 |
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| Product | L-arabinose isomerase |
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| Protein accession | YP_734109 |
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| Protein GI | 113970316 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2160] L-arabinose isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000173872 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0652997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT TCAAACAAAA ACAAGTGTGG TTTATCACGG GTTCGCAGGA TTTATACGGC
CCAAAAGTAT TAGAGCAAGT CGCTAAAAAC AGTGAGCAAA TTGTTTATGG CTTTAATGAA
TCTTCCGCCA TTTCCATTGA AGTGGTGTAT AAGCCAACCG TAAAATCCCC ACGTGAAATT
CACGCCGTAT GTCAAGCGGC CAACAGCGAT GAAAACTGTG TTGGCGTTAT TCTGTGGATG
CACACTTTCT CTCCTGCCAA GATGTGGATT GCTGGCCTTA ATGAATTAAG CAAGCCATTC
ATGCACTTAC ACACTCAGTT CAATGCTGAG CTCCCTTGGA GCGAAATCAA TATGAACTAC
ATGAACACCC ACCAAAGTGC TCACGGTTGC CGCGAATTTG GTTTTATCGG CACTCGTATG
CGTAAAGAGC GCAAAGTGGT TGTGGGTCAC TGGCAATCGA GCGATGTACA GGCTCAAATC
GATGATTGGT GCCGCGCAGC GGCGGGTTGG CACGAGAGCC AAAACCTGCG TATTGCCCGC
TTTGGCGACA ACATGCGTCA AGTGGCCGTA ACCGAAGGCG ACAAAGTTGC CGCACAAATT
CAATTCGGTT ACGAAGTGCA CGCCTACAGC TTAGGTGAAC TCAATGAAGC GATTGCAGCC
ATTGCCGAAG GCGATGTAAC CGCACAACTC GACCGTTACG CCAGCGAATA CCAAGTGGGT
AACGAGCTAT TTGGCGATGA ATACCAATTA GACCGTTTAA GAAAAGAAGC CAAGATTGAA
CTCGGCTTAA CCCAATTCTT AACCCAAGGT GGATTTGGTG CCTTTACCAA CTGCTTCGAA
AACCTCACCG GCATGACAGG ATTACCAGGA CTGGCTACCC AACGTCTGAT GGCGAACGGT
TTCGGTTACG GCGGTGAAGG TGACTGGAAA ACGGCTGCCA TGGTGCGCAT CATGAAGGTG
ATGGGCCAAG GCCGCGCCGG TGGTACTTCA TTTATGGAAG ACTACACCTA TAACTTTGGG
GCGACTGACC AAGTTCTTGG CGCCCACATG TTAGAAGTGT GCCCATCGAT TGCTGCTGCA
AAACCGCGTT TAGAAGTTCA CCGCCACACC ATTGGTGTGC GTTGTGACGT GCCACGTCTG
TTATTCACAG GTAAAGCGGG CCCAGCAATC AACGTATCGA CTATCGATTT AGGCAACCGT
TTCCGTATCA TTCTCAATGA ATTAGATACA GTGACACCAC CACAGGATCT GCCAAATCTG
CCTGTCGCAT CTGCGCTGTG GGAGCCTCGT CCGAATTTAG CGGTTGCCGC CGCAGCTTGG
ATCCACGCCG GTGGTGCTCA CCACTCAGCT TACAGCCAAG CTATCACGAC GGATCAGATT
GTCGACTTTG CTGAAATGGC CGGTGCTGAA CTGGTTATCA TCGATGCCGA TACTAAGATC
CGCGAGTTTA AGAATGAGCT TCGCCAAAAT TCCGTTTATT ACGGTTTAGC AAGAGGTTTA
TAA
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| Protein sequence | MKAFKQKQVW FITGSQDLYG PKVLEQVAKN SEQIVYGFNE SSAISIEVVY KPTVKSPREI
HAVCQAANSD ENCVGVILWM HTFSPAKMWI AGLNELSKPF MHLHTQFNAE LPWSEINMNY
MNTHQSAHGC REFGFIGTRM RKERKVVVGH WQSSDVQAQI DDWCRAAAGW HESQNLRIAR
FGDNMRQVAV TEGDKVAAQI QFGYEVHAYS LGELNEAIAA IAEGDVTAQL DRYASEYQVG
NELFGDEYQL DRLRKEAKIE LGLTQFLTQG GFGAFTNCFE NLTGMTGLPG LATQRLMANG
FGYGGEGDWK TAAMVRIMKV MGQGRAGGTS FMEDYTYNFG ATDQVLGAHM LEVCPSIAAA
KPRLEVHRHT IGVRCDVPRL LFTGKAGPAI NVSTIDLGNR FRIILNELDT VTPPQDLPNL
PVASALWEPR PNLAVAAAAW IHAGGAHHSA YSQAITTDQI VDFAEMAGAE LVIIDADTKI
REFKNELRQN SVYYGLARGL
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