| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1967 |
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| Symbol | |
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| ID | 4252540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2343802 |
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| End bp | 2345088 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118579 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_734097 |
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| Protein GI | 113970304 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000578776 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.974041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATC CTAAATTTTT GCGCAACGAA TTAGCAGTTA CCGCTGAGCG ATTAGCTACC
CGTGGTTTTA TTTTAGATGT CGCTCATCTC ACTCAATTAG AAGAAAAACG TAAGTCACTG
CAAGTGGCGA CTGAAGAGTT ACAAGCTTCG CGTAATGCTA TTTCCAAGTC CATCGGACAA
GCAAAAGCCC GCGGCGAAGA TGTGGATGCC ATCATGGCGC AGGTTGGCGA TTTAGGTGCG
CAATTAGATG CGAAGAAAGT CGAGCTGGCT GCGGTACTTG AAGAAGTGAA CGCGATTGCC
ATGTCGATGC CAAACCTGCC GGATGAGTCT GCGCCTATAG GTGCTGACGA GACTGAAAAC
GTTGAAATCC GTCGTTGGGG CACACCACGC AGCTTCGATT TCCCTGTTAA AGATCATATC
GACTTAGGTG AAGGCCTAAA CGGTTTAGAT TTTAAGAGCG CCGTGAAAAT CACTGGCTCA
CGCTTTATCG TGATGAAAGG CCAAATCGCC CGTTTAAACC GCGCATTAGG TCAGTTCATG
TTAGATCTGC ACACTACTGA GCACGGTTAT ACCGAAGCTT ACGTGCCATT ACTGGTTAAC
GAAGCAAGCT TACTGGGTAC AGGCCAATTG CCTAAGTTTG GTGAAGACTT GTTCCACACT
AAACCTGCGA CCGAAGAAGG CCAAGGTTTA AGCCTGATCC CAACCGCAGA AGTGCCATTA
ACGAACTTAG TGCGTGACAG CATTGTCGAT GAAGACGAAT TACCGATTAA GTTAACCGCG
CATACCGCCT GTTTCCGCAG TGAAGCTGGC TCATACGGTA AAGATACCCG TGGTCTTATC
CGTCAGCACC AATTCGATAA AGTGGAATTA GTGCAACTGG TTAAGCCTGA AGACTCAATG
GCGGCGCTCG AAGCACTAAC GGGCCACGCT GAAACCGTAC TGCAACGCCT CGGTCTGCCA
TACCGCACTG TGATCCTGTG TACCGGTGAC ATGGGCTTTG GTTCAAGCAA AACCTACGAT
ATCGAAGTGT GGTTACCAGG CCAAAACACT TACCGCGAGA TTTCTTCATG TTCAAACATG
AAAGACTTCC AAGCCCGTCG TATGCAAGCC CGTTACCGCG TTAAGGCCGA TAACAAGCCA
GCCTTGCTGC ACACCTTAAA CGGCTCAGGC CTAGCGGTAG GTCGTACGTT AGTTGCGATT
TTAGAAAACT ATCAAAATGC CGATGGTAGC GTGACCATTC CAGAAGCTCT GCGTCCATAC
ATGGGCGGAC TGACTCAGAT CGGTTAA
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| Protein sequence | MLDPKFLRNE LAVTAERLAT RGFILDVAHL TQLEEKRKSL QVATEELQAS RNAISKSIGQ
AKARGEDVDA IMAQVGDLGA QLDAKKVELA AVLEEVNAIA MSMPNLPDES APIGADETEN
VEIRRWGTPR SFDFPVKDHI DLGEGLNGLD FKSAVKITGS RFIVMKGQIA RLNRALGQFM
LDLHTTEHGY TEAYVPLLVN EASLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNLVRDSIVD EDELPIKLTA HTACFRSEAG SYGKDTRGLI RQHQFDKVEL VQLVKPEDSM
AALEALTGHA ETVLQRLGLP YRTVILCTGD MGFGSSKTYD IEVWLPGQNT YREISSCSNM
KDFQARRMQA RYRVKADNKP ALLHTLNGSG LAVGRTLVAI LENYQNADGS VTIPEALRPY
MGGLTQIG
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