| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1922 |
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| Symbol | |
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| ID | 4252496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2292604 |
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| End bp | 2293884 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118533 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_734053 |
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| Protein GI | 113970260 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000089326 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000054004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGCAAT TACGTCTTGA ACCTGTTGTG CAAGTCCGCG GTGAGATCAA TATCCCTGGC
TCAAAAAGCA TTTCTAACCG CGCGTTATTA TTGGCGACCT TAGCTAAAGG CACCACCACG
CTAACCAATT TGCTCGACTC CGATGATATT CGTCATATGT TGGCGTCTTT AAAGCAGTTG
GGGGTTGAAT ACCGCTTATC GCAAAATAAT ACTGTCTGCG AGCTTATTGG TTTAGGTGGC
GCTATCTCGG CGGACACCGC GCAAACGTTG TTTCTAGGCA ATGCGGGCAC GGCTATGCGT
CCATTGTGCG CTGCGCTGAC CTTAGGTCGT GGCGAATTTA CCCTAACGGG CGAACCGCGC
ATGGAAGAGC GTCCCATTGG TGACTTGGTC GATGCCCTAA AACAATTGGG CGCTAATATT
GTGTACCTTA AGAATGAAGG GTTTCCGCCT CTGGCCATCA ATGCAACCGG GCTTAACGGT
GGCGATGTGG AAATTGCTGG CGATCTGTCT AGCCAATTCT TAACCGCGCT GTTAATGGTT
GCCCCCCTCG CTAAGGACAG TGTGAATATT CATGTCAAAG GTGAACTGGT TTCAAAACCT
TATATCGACA TTACCTTAGC CTTGATGGCC CAGTTTGGCG TTCAGGTGAT TAACCATGAC
TATGCCCGCT TTGAGATCCC AGCTGGGCAG CAGTATGTGT CTCCGGGTAA AGTGTTAGTA
GAAGGGGATG CATCTTCTGC ATCTTACTTT TTAGCAGCGG GAGCCATTAA AGGCGGCGAA
GTGAAAGTCA CTGGTGTTGG CCGTTTAAGC ATTCAGGGCG ATGTGAAATT TGCCGATGTG
CTGGAAAAAA TGGGCGCTGA TATTGAGTGG GGCGATGATT ACATTATTGC CCGTGGCGCG
CCGTTAACCG CGGTTGATTT AGACATGAAT CATATTCCCG ATGCGGCAAT GACCATTGCC
ACCGCGGCCT TGTTTGCTAA GGGCACGACC ACCATTCGTA ACATCTATAA CTGGCGCATT
AAAGAGACCG ACCGATTAGC TGCGATGGCC ACAGAGCTGC GTAAAGTGGG AGCGTTAGTG
GAAGAGGGGC ATGATTATAT TCAAATCACG CCGCCAGCTG TGTTGAATAC CGCAGAGATT
GATACTTATA ACGACCACCG CATGGCCATG TGCTTCTCCA TGATGGCCTT TGCCAATTGC
GGGATCACTA TCAACGATCC CGACTGCACC TCGAAAACCT TCCCTGATTA TTTTGCCCAA
TTTGCCAGTC TGAAAGTCTA A
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| Protein sequence | MKQLRLEPVV QVRGEINIPG SKSISNRALL LATLAKGTTT LTNLLDSDDI RHMLASLKQL
GVEYRLSQNN TVCELIGLGG AISADTAQTL FLGNAGTAMR PLCAALTLGR GEFTLTGEPR
MEERPIGDLV DALKQLGANI VYLKNEGFPP LAINATGLNG GDVEIAGDLS SQFLTALLMV
APLAKDSVNI HVKGELVSKP YIDITLALMA QFGVQVINHD YARFEIPAGQ QYVSPGKVLV
EGDASSASYF LAAGAIKGGE VKVTGVGRLS IQGDVKFADV LEKMGADIEW GDDYIIARGA
PLTAVDLDMN HIPDAAMTIA TAALFAKGTT TIRNIYNWRI KETDRLAAMA TELRKVGALV
EEGHDYIQIT PPAVLNTAEI DTYNDHRMAM CFSMMAFANC GITINDPDCT SKTFPDYFAQ
FASLKV
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