| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1921 |
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| Symbol | |
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| ID | 4252495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2290978 |
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| End bp | 2292168 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118532 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_734052 |
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| Protein GI | 113970259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0115062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000119915 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAACT CACTCGTCGC AATGCCTGCG GATCCTATCC TCGGCCTATT AACCCAGTAC
CGTGAAGACT CACATCCTCA AAAAGTCGAC TTAGGTGTGG GCGTTTATAA GGATCCCGCT
GGAAACACTC CCATCCTTAA TTGCGTGAAA AAAGCCGAAA AATTCCGTTT AGACACTGAA
ACCACCAAAG TGTATATCGG CCCAACCGGT TCGCCTCAGT TTAATACCCT GATAACAGAA
TTAGCCTTTG GCAGTGATCA CAGCGCGATT ATCGCCAACC GAATTCGTAC TGTATCCACG
CCTGGTGGTA CAGGCGCCCT GCGCGTTGCC GGTGATTTTA TTAAACGCTG CAATCCTAAT
GCTGTGCTAT GGGTGAGCGA TCCCACATGG GCTAACCATA TAGGCTTGTT TGAAGCGGCG
GGTCTGACTG TTAAAACCTA CCCTTACTAT GATTACGACA CTAAATCGTT AAAGTTTGAT
GAGATGCTCA GCGCGCTTGC GCAGATTGGC CCGAACGATG TTGTGCTATT CCACGCCTGT
TGCCATAACC CGAGCGGGAT GGATTTAACG GCAGAACAAT GGGATAAAGT GGTTGCCCTC
ACCAAGGAGC AAGGTTTTAC CCCGCTTATC GACATGGCTT ACCAAGGTTT TGGTGATGGG
GTCGATATCG ATGCCTACGG CGTGCGTAAA ATGGCCGCCG CGGTCGATAA TATGATCCTG
TGTAGCTCTT GCTCGAAAAA CTTTGGTCTG TACCGTGAGC GTATCGGTTC ATGCTCTGTG
GTTGCAAAAG ATGCAAACAC GGCAAGCATC GCGCAATCAG TACTGCTTTA CGTAGTTCGT
TGCCTCTACT CCATGCCGCC AGCCCACGGC GCGGCGATTG TCGAAACCAT TCTAGGTTCG
GCAGAATTAA AGCAAGAGTG GTTAGATGAG CTCAAAGTAA TGCGCGACCG TATCAACGGT
AACCGCGCCA TTTTAGTGGA AAACCTCAAA ACCAATGGCG TGGACCGCGA CTTTAGCTTT
ATCGCACGTC AAAAAGGCAT GTTCTCTTTC CTAGGGGTTA ATCCTGAGCA AGTGGCGCGT
CTGCAGAAAG AATTCAGCAT TTATATGGTG GGTTCGAGCC GCATTAGCAT TGCAGGCATT
AGCGAAGACA ATGTGGATTA CTTAGCTAAG TCGATTGCCG AAGTACTGTA A
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| Protein sequence | MFNSLVAMPA DPILGLLTQY REDSHPQKVD LGVGVYKDPA GNTPILNCVK KAEKFRLDTE
TTKVYIGPTG SPQFNTLITE LAFGSDHSAI IANRIRTVST PGGTGALRVA GDFIKRCNPN
AVLWVSDPTW ANHIGLFEAA GLTVKTYPYY DYDTKSLKFD EMLSALAQIG PNDVVLFHAC
CHNPSGMDLT AEQWDKVVAL TKEQGFTPLI DMAYQGFGDG VDIDAYGVRK MAAAVDNMIL
CSSCSKNFGL YRERIGSCSV VAKDANTASI AQSVLLYVVR CLYSMPPAHG AAIVETILGS
AELKQEWLDE LKVMRDRING NRAILVENLK TNGVDRDFSF IARQKGMFSF LGVNPEQVAR
LQKEFSIYMV GSSRISIAGI SEDNVDYLAK SIAEVL
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