| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1902 |
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| Symbol | ruvB |
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| ID | 4252476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2265990 |
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| End bp | 2266994 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118513 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_734033 |
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| Protein GI | 113970240 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000022467 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000432146 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGAAG CAGATAGACT GATCCAGCCG CAGCTGCAAG GTCAAGATGA TGTTATCGAC
AGGGCGATGC GCCCTAAATT GCTCGATGAA TATACTGGGC AGGATGATAC GCGTGCCCAA
TTAAAAGTGT TTATTCAAGC GGCAAAGAAT CGCGAAGAAG CCTTAGACCA TATGTTGATC
TACGGCCCGC CGGGGTTAGG TAAAACCACC TTAGCCATGA TCGTGGCTAA TGAAATGGGG
GTGAACATCA AATCGACGTC GGGGCCAGTG CTCGAGAAAG CCGGGGATTT GGCGGCGCTG
CTCACCAATC TTGAGGCGGG GGATGTGCTT TTTATCGATG AAATTCACCG TTTAAGTCCT
GTCGTCGAAG AAATTCTGTA TCCTGCGATG GAAGACTATC AGCTGGATAT TATGATAGGT
GAGGGGCCAG CAGCTCGCTC GATTAAGTTG GATCTACCGC CTTTTACCTT GGTGGGGGCG
ACCACGCGGG CAGGTGCGTT AACCTCTCCG CTAAGGGCGC GTTTTGGCAT TCCACTTCGG
CTCGAGTTTT ATAATGTTAA AGATTTAAGC ACCATTGTGA CACGTTCGGC GCAGGTGATG
GGATTGGCCA TTGATAGTGA AGGGGCGACC GAAATTGCCA AACGCTCACG GGGCACTCCG
AGGATTGCCA ACCGTTTACT GCGCCGAGTG CGTGATTATG CGGAAGTGAA ACACGATGGC
GCTGTAACCA AGAAAGTCGC TGAGCACGCG CTCGATTTAC TCGATGTTGA TGGTGAAGGG
TTCGATTATA TGGACCGAAA ACTGCTACTC GCGATTATCG ATAAGTTTAT GGGTGGCCCT
GTGGGGCTTG ATAACCTTGC CGCGGCAATT GGTGAGGAGC GTGAAACCAT TGAAGATGTA
TTGGAACCTT TCCTTATCCA ACAAGGCTTT ATCCAACGAA CGCCACGCGG TCGTATTGCC
ACAACCAGAG CCTATCTGCA TTTTGGCATG ATAAAACCAG AGTAA
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| Protein sequence | MIEADRLIQP QLQGQDDVID RAMRPKLLDE YTGQDDTRAQ LKVFIQAAKN REEALDHMLI
YGPPGLGKTT LAMIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLEAGDVL FIDEIHRLSP
VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGALTSP LRARFGIPLR
LEFYNVKDLS TIVTRSAQVM GLAIDSEGAT EIAKRSRGTP RIANRLLRRV RDYAEVKHDG
AVTKKVAEHA LDLLDVDGEG FDYMDRKLLL AIIDKFMGGP VGLDNLAAAI GEERETIEDV
LEPFLIQQGF IQRTPRGRIA TTRAYLHFGM IKPE
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