Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1899 |
Symbol | |
ID | 4252473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2263730 |
End bp | 2264476 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638118510 |
Product | hypothetical protein |
Protein accession | YP_734030 |
Protein GI | 113970237 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000661567 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000893936 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGGTC ATAGTAAGTG GGCCAACATT AAGCACCGCA AAGCAGCGCA AGATGCTAAA CGCGGTAAAC TCTTTACCAA ATTTATCCGC GAGTTAACGG TTTCAGCCCG TGAAGGTGGC TCAGATCCCG ATTCAAACCC GCGTCTGCGT ATCGCAATCG ATAAAGCGCT CGGCGGCAAC ATGACCCGCG ACACCATTGA GCGCGCAATC AAACGCGGCG CTGGTGAGCT TGAAGGCCAG CAACTCGAAA CCATTATTTA CGAAGGCTAT GGCCCAGGCG GCACCGCTGT GATGGTCGAA ACCATGACTG ATAACCGTAA CCGTACCGTG AGCGGCGTGC GTAATGCCTT TAGTAAATCG GGTGGGAACT TAGGGACCGA TGGTTCGGTT GCCTATTTGT TCACTAAGCG CGGCGTGTTG TCCTATGCGC CGGGCACAGA TGAAGACGCC CTGATGGACG CGGCGCTAGA AGCGGGCGCC GAAGATGTGG TGAGTTACGA TGATGGTGCA ATTGACGTAT TTACCGAACC GACGGAGTTT TATGGGGTGA AAGATGCCCT CGATGCGGCG GGATTTGTCA GTGATAACGC CGAAATCGCG ATGATAGCCT CGACCAAAGC GGAGTTAGAT GCAGAGACGG CAGAGAAGTT TATGCGTCTT ATCGATACCC TCGAAGAGCA CGATGATGTG CAAGAGGTGT ATCATAATGC CGAAATCTCC GATGAGATTA TGGAAAGCTT AGGGTAA
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Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVSAREGG SDPDSNPRLR IAIDKALGGN MTRDTIERAI KRGAGELEGQ QLETIIYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFSKS GGNLGTDGSV AYLFTKRGVL SYAPGTDEDA LMDAALEAGA EDVVSYDDGA IDVFTEPTEF YGVKDALDAA GFVSDNAEIA MIASTKAELD AETAEKFMRL IDTLEEHDDV QEVYHNAEIS DEIMESLG
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