| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1869 |
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| Symbol | |
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| ID | 4252443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2223859 |
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| End bp | 2226375 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118480 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_734000 |
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| Protein GI | 113970207 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGA CAACAGTACC TTCGCAGCAG GCTCGCAGCT TAACTCACCG CCGCAACTTA
ACTCGTAAGC CGATTGCGCT CGCAATTGCC GCAAGCATAA TCGGCGTTGC CAGCTTAACG
GGCTGCTCAC CCTCGGCCCC CAATGCAGAC ACATCAACAC CAACCGTCAC AAAAGCCACA
GACGCACAGA TTGCCCCCGG CGCCCCCGGC AAAGCCCCAA CCTGGGCGTT CTCCGGCAAA
ACCGGTATCG GTACCTCCTA TGAGCCTTAT ACTCAAGGGC AATACCAAGA CAGCATCCAA
AATCCCATTA GCCGAGTGTG GTTCTCCGTC GCACAGGGGA TTTTAACCGA GACCATGTAC
GGCCTTATTC ACAACGCTCA GCTCAAAGAG TTGCAATTTG TGATCACAGG CAATGGCTTT
GTCGATACCG AAAAAGACAA CACTATCAGC AGCATTGAAT ACTTAGATAC CGATGCCAAT
GGCCGCCCAC AATCCTTGGC CTATAAGATT ATCAATCGCG ATGTTGAAGG TAAGTATCAG
ATAGAAAAAC ATATCTTTAC CGATCCCGAC CGCGATACGC TGATGATGCG CGTGACGTTT
ACCGCCTTTG AAGCAGGCAT CACACCGCAT TTATACGTTA ACCCCCATAT CGATAATGCG
GGCGCGAATG ATATTGGCAG AATCGATCAT CAAGCCCTTA TCGCTCGCAC CGCCGATCCC
CACAGCAGCG TAATGACAGT TAAATCGGAT ATCGATTTTA CGCAGGCGAC TACGGGCTTT
GTCGGTGTAT CCGACGGTTT GGCCGATTTA GGCGATAACG GCAAGCTTGA TACGCTGTAT
CAGGCCACCA GCAACGCCGA AAATCCTACT CAAGGCAACA TTGCCTTTAC CGCCAGTTAT
CCCGTACTCC AAGCGAATCA AGCTCTTAAT GTGAATTTGG CGATTGGTTT TGGCCATGAT
GAAACGAGCA GTTTAGCCAA TGCCAACGCC AGCTTAACGG CGGGGTATGA CAAAGTGCTG
AGCCAATACA ACGCTGGTTG GCACAGTTAT TTACACTCGC TACCCGCGAT GCCTGATATG
GCGCAAAGCA CCACAGATAA TGGCAAGCTG CTGTATACCA GTGCCATGGT ACTTAAGGCG
CAGGAAGATA AAACCTACGC TGGCGCCCTT ATCGCGTCGC TTTCTAATCC TTGGGGCGAT
ACCGTACCTG CTGTCACACC CAGCACGGGC TACAAGGCCG TTTGGCCCCG TGACTTTTAC
CAGTGCGCCA TGGCATTTCT CGCCATGGGC GATACGCAAA CGCCTAAAGT CGCCTTTGAG
TACCTTAAAA AGGTGCAAGT GAGTGACAAA ACTCCAGGCT TTAGCGGCAC GCCCGGTTGG
TTTTTACAAA AGACTCATGT GGATGGCCAA ATCGAATGGG TTGGCGTACA GCTCGACCAA
ACGGCGATGC CGATCATGCT CGGCTGGAAA CTCTGGCAGG CAGGCGTACT CAGCCAAGCG
GAACTGAGCC ATTGGTATCA AGAGATGCTA AAAGCTGCGG CGGACTTTTT AGTCAGCGGC
GGCGAGGTGA ATCTTGACTG GAATCACACG CAAATTACGC CACCGAAAAC CCAGCAAGAA
CGTTGGGAAG AACAAGCTGG TTATTCGCCC TCCACCACGG CCGCAGTTAT CGCAGGTTTA
GTGGCTGCGA GTGATATTGC TAAGGCAGTA AACGACAGCG ATACCAGTCA GCGTTATCTC
GCAACCGCTA AAACGCTTAA TCAACAACTT GAAAAACACT TAGTGACGAC CCAAGGTTTG
CTTACCGATA GCCAAGGCAT TAAGGCGCCT TATTATCTGC GATTAAGCCC CAACGGTGAG
CCAAACACCG CCGAGACACT CGCCGCGAAT AATGGTCGTG CGGGATTAGA TCAACGTCAG
ATCCTCGATG GCGGCTTTTT AGAACTGGTG CGCTACGGCG TGCGTGGCGC AACCGATAAG
CTGATTAATC AAAGCCTAGC GCTGGTGGAT AACACTGAGC TTGAGGAAAA TTTACGCCTC
AAATACAACT TTACTGCCAA AGATGGCAGC AACGTTCCCG GCTTTAGGCG TTACGGTAAC
GATGGCTACG GTGAAGATAC CCTCACTGGC GCAAACTACG CCGAATCAGG CAGTAATAGC
GACAACCAAC GCGGCCGCGT CTGGCCCTTC TTCACCGGCG AGCGTGGTCA TTTTGAATTG
GCCCTCGCTA GCGCCAAGGG AGAGCTAACG GGTACTCACG CGCAGCAAAC CAAACAGCAG
CTTATCAATA CCTATGTGCA AGGGATGGAA ACCTTCGCCA ACGCGGGTCT GATGCTCCCC
GAGCAAGCGT GGGACGGTGT GGGTAACGCC ACACGTTACC AATATCAACT CGGCCAAGGC
ACTAACTCCG CCACCCCACT CGCTTGGACC CACGCTGAAT ATATCAAGCT GGTACGTTCA
ATGAGCGACG GTCGAGTCTG GGATAACTAT CCAATCGTCC CAGAAGCGTT GAAATAA
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| Protein sequence | MALTTVPSQQ ARSLTHRRNL TRKPIALAIA ASIIGVASLT GCSPSAPNAD TSTPTVTKAT
DAQIAPGAPG KAPTWAFSGK TGIGTSYEPY TQGQYQDSIQ NPISRVWFSV AQGILTETMY
GLIHNAQLKE LQFVITGNGF VDTEKDNTIS SIEYLDTDAN GRPQSLAYKI INRDVEGKYQ
IEKHIFTDPD RDTLMMRVTF TAFEAGITPH LYVNPHIDNA GANDIGRIDH QALIARTADP
HSSVMTVKSD IDFTQATTGF VGVSDGLADL GDNGKLDTLY QATSNAENPT QGNIAFTASY
PVLQANQALN VNLAIGFGHD ETSSLANANA SLTAGYDKVL SQYNAGWHSY LHSLPAMPDM
AQSTTDNGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD TVPAVTPSTG YKAVWPRDFY
QCAMAFLAMG DTQTPKVAFE YLKKVQVSDK TPGFSGTPGW FLQKTHVDGQ IEWVGVQLDQ
TAMPIMLGWK LWQAGVLSQA ELSHWYQEML KAAADFLVSG GEVNLDWNHT QITPPKTQQE
RWEEQAGYSP STTAAVIAGL VAASDIAKAV NDSDTSQRYL ATAKTLNQQL EKHLVTTQGL
LTDSQGIKAP YYLRLSPNGE PNTAETLAAN NGRAGLDQRQ ILDGGFLELV RYGVRGATDK
LINQSLALVD NTELEENLRL KYNFTAKDGS NVPGFRRYGN DGYGEDTLTG ANYAESGSNS
DNQRGRVWPF FTGERGHFEL ALASAKGELT GTHAQQTKQQ LINTYVQGME TFANAGLMLP
EQAWDGVGNA TRYQYQLGQG TNSATPLAWT HAEYIKLVRS MSDGRVWDNY PIVPEALK
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