| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1859 |
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| Symbol | |
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| ID | 4252433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2207398 |
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| End bp | 2210070 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118470 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_733990 |
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| Protein GI | 113970197 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000127168 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTACGC AAACAACCGT GGCGCGTGCG GTTCGTTTTA GTTTACTCGC TTTAGTCTCC
GCCTCGGTGA CACCGCAAGT ATTTGCCGCC GATGAAGCGG CCGTTATCGA TGATAAAGTG
GAGCGTATTG AGGTCACGGG TTCACGTATT AAACGTACCG ATCTTGAAAA TGCCTCCCCT
ATCGTGGTGG TGAGCGCCGC AGATATCGAA AAAGGTGGCT TTAACTCAGT ACAAGACGTG
TTAGGCAACC TGTCGCAAAA CTCCGGTGGG TCGATGACTC AACAGGAAGT GCACGGCTTT
ACCCCTGCGG CATCGGCCGT CAACCTACGT GGTGTGGGCG CCGGACGTGT GCTGACGCTG
ATCAACGGTA AACGTGTGCC TAAATATCCC TTTGGCGCTG GCGGCACCGA TAGCTTTGTC
GATACCGCCA ACATTCCGTT AGGGGCGATT GAGCGTATTG AAATTTTAAC CACGGGCGCT
TCGGCCATTT ACGGTTCCGA TGCGATGGGC GGCGTAATCA ACATCATCTT GAAAAAAGAC
GTTGAACAAA GCACCTTCAA ATATCGCCAC TCAGATACCT TCGATGGCGG CCTGCAGAAC
AACCAGTTCT CCTTTATGAC GGGCGTCAGC AGCGATAAAG CGAATCTGAC TTTCTTCGCC
GAATATGAAG ATCGCCAAGC ATTAAAAGCC TCAGACCGCC CAGAATGGGG CACAGATATT
ATCCCGGGTA ACTATTATGC TGGTTACAGC TCCTATGGCG CCAACCTTGT GGATAGCAAT
GGCAAACTAC TCAAGAGCTT AAGCGCCGCC GAATGTGATG CGCGCGGCTA TGTGATGATG
TCCAATGGCA AATGTGGTTT CGATCGCTCC GCACAGCGCG ACTTTTCGCC TGAGCAAAAG
CGCTACTCCA CCATGATAAA CCTCACCAAA GACTTAAACG ACAATCATCA GCTGTATTCG
CGCCTCGATT ACACCCATGC TTCGACCTAC ACAGAAATTG AATCGGCCAC TGTGGGCTAC
GATTTTATGT TTAACGTGTC TGGCGATAAC GTCACTATCG TCGATGAGCT CAATGGCTTA
TCCCAAGTGT TCGATAAAAA TACCGCCTTC GGCGGAGATT TTGCCGGCGC TGCTGATGGG
GACTATTACT ACACTCGCCG TATGTCAGAG TTAGGTCCAC GCACCTCTGA TTTTGAGACC
AATAACTTCT CCTTCTTATT AGGCAGCAAA GGTTACCTCA CGGATACTAT CGAGTACGAC
ACCTCATGGT CGATTGCGCG CCAAACGGTA GATTCCACCA CCGCAGGTTC GCCCACTTAC
CAAAGCATGT GGAATTACCT CACCGCAGGC ACAAACGGCA ATTCGCTACT GGATGTGATT
TCACCGGACG ATGCCGCAAT GCTGGATTTC CAAGGTGGCA AAAAGGGGCA ATCCACCCTA
TCGAGCTTTA ACGCGGGGAT CAGTGGCGAA GCCTTTGAAT TACCAGCAGG AACAGTAGCT
TATGCCGTGG GCGTCGAATA CGGTAAAGAA TGGTTCTACG ATAAGTCCGA TAGCTTCACC
AGCAATGGTG GCGTGATTGG TAAAGGCGGC AGTAGCGCTC AAGGTGAACG TGAGCAATAC
GCAGGTTATG CCGAAGTCGC CGTGCCTGTG ATCGAAAACC TCACCGTCAC CCTTGCGGGC
CGTTACGACT ACTATGACGA TTTATCCGAT GTCGGCGGTC AATTCAGTCC ACAAGTCGCA
GTCGAGTATC GCCCGATTGA TAATCTGTTG TTACGCGGTC TGTATGCCGA AACCTTCCGT
GCACCAGACA TGCAGCGCTT ATTTGGTGAG CCAACGGCAG CCTATAGCAC AGTGATCGAC
ACTCCAACCT GTGAGGCCGC GGGTGGCACG GGTCCAGCCT GTGAGAAGAT TGACTCACTG
CCAATTACTA TCGGTGCAAA CCCAGAACTT GAAGCGGAAA CCGGTAAAAA CTATAACCTC
GGCATGGTGT GGGATTATAA CGATCTCAAT TTAACCTTGG ACTACTGGAT TGTTGAAATC
GATAACCTAG TCAATAGCCC TAGCGCCCAG TATATCTTGG ATCACTCTGA CGCCTTCGCC
GATAAGATTT TCCGTGATGC AAGCGGCAAG TTAATTCAAG TGAATACTCA AGCCATCAAC
ATGTCATCCC AAGAAACTTC GGGTATCGAC TTCTCGGTGG GCTATCGCTA TGAGACTTCA
GGCTACGGCG ATGTCACCGC CCGCTTGGAA GGCACCTATT TGCTGAAATG GGAGGAGCAA
TTAACCCCAG ATTCTGAGCC ATTAGATCTG ATCGATGGTG ACGACTCTGC CCCGCAAATC
CGTGGTAACT TAAATCTGGG TTGGAACTAC GATGACTTCG CTACCAACCT GCTGATCAAG
TACACCGACA GCATGAATGG CCAGCGTAAA GAGGCATTCA TTAACAATGG GTTAGCGGAT
AAATATGCCG TCACTATCGA CAGCCATGTC GAAGTGAACT GGGCCGCCAG CTATATGTTA
ACCGATGCGA TTAAGTTCTC CGGCGGGATT AATAATATCT TCGATGCAGG CCCTGAGATT
GATGAAACCC AAAACTCTTG GCCACATTAC CCACGTTCTT ACTACAACGT TATTGGGCGT
GAATATTATT TAGCCGTAGA GATGAACTTC TAA
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| Protein sequence | MTTQTTVARA VRFSLLALVS ASVTPQVFAA DEAAVIDDKV ERIEVTGSRI KRTDLENASP
IVVVSAADIE KGGFNSVQDV LGNLSQNSGG SMTQQEVHGF TPAASAVNLR GVGAGRVLTL
INGKRVPKYP FGAGGTDSFV DTANIPLGAI ERIEILTTGA SAIYGSDAMG GVINIILKKD
VEQSTFKYRH SDTFDGGLQN NQFSFMTGVS SDKANLTFFA EYEDRQALKA SDRPEWGTDI
IPGNYYAGYS SYGANLVDSN GKLLKSLSAA ECDARGYVMM SNGKCGFDRS AQRDFSPEQK
RYSTMINLTK DLNDNHQLYS RLDYTHASTY TEIESATVGY DFMFNVSGDN VTIVDELNGL
SQVFDKNTAF GGDFAGAADG DYYYTRRMSE LGPRTSDFET NNFSFLLGSK GYLTDTIEYD
TSWSIARQTV DSTTAGSPTY QSMWNYLTAG TNGNSLLDVI SPDDAAMLDF QGGKKGQSTL
SSFNAGISGE AFELPAGTVA YAVGVEYGKE WFYDKSDSFT SNGGVIGKGG SSAQGEREQY
AGYAEVAVPV IENLTVTLAG RYDYYDDLSD VGGQFSPQVA VEYRPIDNLL LRGLYAETFR
APDMQRLFGE PTAAYSTVID TPTCEAAGGT GPACEKIDSL PITIGANPEL EAETGKNYNL
GMVWDYNDLN LTLDYWIVEI DNLVNSPSAQ YILDHSDAFA DKIFRDASGK LIQVNTQAIN
MSSQETSGID FSVGYRYETS GYGDVTARLE GTYLLKWEEQ LTPDSEPLDL IDGDDSAPQI
RGNLNLGWNY DDFATNLLIK YTDSMNGQRK EAFINNGLAD KYAVTIDSHV EVNWAASYML
TDAIKFSGGI NNIFDAGPEI DETQNSWPHY PRSYYNVIGR EYYLAVEMNF
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