Gene Shewmr4_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1854 
Symbol 
ID4252428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2202957 
End bp2203562 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content49% 
IMG OID638118465 
Productcarbonate dehydratase 
Protein accessionYP_733985 
Protein GI113970192 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00119541 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000969176 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACTAC TTAAACCCTT ATTCGATAAC AACCGCCGCT GGGCCGGACG CATTCGCCAA 
GAGCACCCTG ACTTTTTTGA GCAACTGGCG AAACAGCAGA ACCCTGAATA TCTTTGGATT
GGTTGTTCTG ACAGCCGAGT ACCTTCTAAC CAAATCATCG ATTTAATGCC GGGCGAAGTC
TTCGTTCATC GCAATATTGC CAACATGGTG ATCCACACCG ATCTTAACTG CCTGTCAGTA
CTGCAATACG CCATCGATGT GCTTAAGGTG AAGCACATTA TGGTAGTAGG CCACTACGGC
TGTGGCGGTG TACGTGCGGC CATGGGGAAT CAACGCTTAG GGCTTATCGA CAACTGGCTC
GGTCATTTAC GTGATGTTTA CCGTCTGCAT CAAGATGAAT TAATGCAAAT GGATGAAGCC
AAACGTTTCG ACCGCCTGTG TGAACTCAAC GTAATTGAGC AAGTGGCCAA CGTCACCAGC
AGCACTATCG TGCAAGAAGC TTGGGCTCGC GGCCAAGAAC TGGCAATCCA CGGCTGGATT
TACGGTATTG ATAATGGTCT GTTAACCGAT CTTGATGTGA CTGTCGATCG CGCGCAAAAG
ATTTAA
 
Protein sequence
MKLLKPLFDN NRRWAGRIRQ EHPDFFEQLA KQQNPEYLWI GCSDSRVPSN QIIDLMPGEV 
FVHRNIANMV IHTDLNCLSV LQYAIDVLKV KHIMVVGHYG CGGVRAAMGN QRLGLIDNWL
GHLRDVYRLH QDELMQMDEA KRFDRLCELN VIEQVANVTS STIVQEAWAR GQELAIHGWI
YGIDNGLLTD LDVTVDRAQK I