Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1854 |
Symbol | |
ID | 4252428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2202957 |
End bp | 2203562 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118465 |
Product | carbonate dehydratase |
Protein accession | YP_733985 |
Protein GI | 113970192 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00119541 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000969176 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACTAC TTAAACCCTT ATTCGATAAC AACCGCCGCT GGGCCGGACG CATTCGCCAA GAGCACCCTG ACTTTTTTGA GCAACTGGCG AAACAGCAGA ACCCTGAATA TCTTTGGATT GGTTGTTCTG ACAGCCGAGT ACCTTCTAAC CAAATCATCG ATTTAATGCC GGGCGAAGTC TTCGTTCATC GCAATATTGC CAACATGGTG ATCCACACCG ATCTTAACTG CCTGTCAGTA CTGCAATACG CCATCGATGT GCTTAAGGTG AAGCACATTA TGGTAGTAGG CCACTACGGC TGTGGCGGTG TACGTGCGGC CATGGGGAAT CAACGCTTAG GGCTTATCGA CAACTGGCTC GGTCATTTAC GTGATGTTTA CCGTCTGCAT CAAGATGAAT TAATGCAAAT GGATGAAGCC AAACGTTTCG ACCGCCTGTG TGAACTCAAC GTAATTGAGC AAGTGGCCAA CGTCACCAGC AGCACTATCG TGCAAGAAGC TTGGGCTCGC GGCCAAGAAC TGGCAATCCA CGGCTGGATT TACGGTATTG ATAATGGTCT GTTAACCGAT CTTGATGTGA CTGTCGATCG CGCGCAAAAG ATTTAA
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Protein sequence | MKLLKPLFDN NRRWAGRIRQ EHPDFFEQLA KQQNPEYLWI GCSDSRVPSN QIIDLMPGEV FVHRNIANMV IHTDLNCLSV LQYAIDVLKV KHIMVVGHYG CGGVRAAMGN QRLGLIDNWL GHLRDVYRLH QDELMQMDEA KRFDRLCELN VIEQVANVTS STIVQEAWAR GQELAIHGWI YGIDNGLLTD LDVTVDRAQK I
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