Gene Shewmr4_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1852 
Symbol 
ID4252426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2200290 
End bp2201360 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content46% 
IMG OID638118463 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_733983 
Protein GI113970190 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.18302e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.2761e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTTTA AAAATTTTAA AGTAGTTGAA AAGATGATCT TCGGTCGTGG CTCCTTCGCA 
CAATTGGACG AAGTATTAGC TGCACAGCGT AAGGCCGACG ATGACTTCGT GGTATTTTTA
GTCGATGACG TTCACCAAGG CAAACCACTC GAAGCACGCA TCCCTGTAAA AGCCCAAGAC
TTACTGATTT GGGTTAACGT TGATGAAGAG CCAAGCACAA TTCAAATCGA CACCTTAACT
GAGCAGGTTC AAGCTTTTAA TAGCAAATTG CCAGTCAGTG TTGTGGGTTT AGGTGGCGGT
TCAACCATGG ACGTCGCAAA AGCGGTATCG CTGATGCTGA CCAACCCAGG CGGCTCTGCC
ATGTATCAAG GTTGGGATTT AATCAAAAAC CCAGCGGTTC ACCACATTGG TATTCCAACT
ATTTCAGGTA CGGGTGCTGA AGCGTCACGC ACCGCAGTAT TATGTGGTCC AGTGCGTAAA
CTGGGTCTTA ACTCAGATTA CACAGTGTTC GACCAAATCA TCATGGACTC TGAGTTAATC
GATGGCGTTG AAACTGACCA ATGGTTCTAC ACAGGTATGG ATTGCTATAT CCACTGCGTT
GAATCATTAG AGGGTACCTT CTTAAACGAA TTCTCTAAGT CATACGCCGA AAAAGCCATG
GAGCTTTGCC GCCAAGTGTA CTTAGAAGAT CACCCAGAAA AAGACGACAA GCTGATGATG
GCGTCATTTA TGGGCGGTAT GAGTATCGCT TACAGCCAAG TGGGTGCATG CCACGCGGTA
TCTTATGGTC TGTCTTACAT CCTCGGCTAC CACCATGGTA TCGGTAACTG TATCGCCTTC
GACGTGTTAG AAGAATTCTA TCCAGAAGGT GTGGCTGAAT TCCGTCTGAT GATGAAGAAG
CACAACATCA CTCTGCCGAA GAACATCTGT AAAGATCTGC CAGATGAAAC CATCGCGAAA
ATGGTTGCCG TGACTAAGAG CATGGGTCCA TTATGGGCAA ACGTGTACGG CCCAACATGG
GAAGAAAAAG TCACTGACGA AATGTTGACT GCGCTGTTCC GTCGCATTTA A
 
Protein sequence
MSFKNFKVVE KMIFGRGSFA QLDEVLAAQR KADDDFVVFL VDDVHQGKPL EARIPVKAQD 
LLIWVNVDEE PSTIQIDTLT EQVQAFNSKL PVSVVGLGGG STMDVAKAVS LMLTNPGGSA
MYQGWDLIKN PAVHHIGIPT ISGTGAEASR TAVLCGPVRK LGLNSDYTVF DQIIMDSELI
DGVETDQWFY TGMDCYIHCV ESLEGTFLNE FSKSYAEKAM ELCRQVYLED HPEKDDKLMM
ASFMGGMSIA YSQVGACHAV SYGLSYILGY HHGIGNCIAF DVLEEFYPEG VAEFRLMMKK
HNITLPKNIC KDLPDETIAK MVAVTKSMGP LWANVYGPTW EEKVTDEMLT ALFRRI