Gene Shewmr4_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1778 
Symbol 
ID4252352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2112038 
End bp2112949 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content52% 
IMG OID638118389 
ProductATPase 
Protein accessionYP_733909 
Protein GI113970116 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACATT CTGGTTTAAG CCAACTATTA CAACAACTTG AACAAGTATT ATTAGGCAAG 
CCACGGCAAA TTCGCTTAGC CCTCGCCTGT ATTCTCGCCC GTGGGCACCT ATTAATTGAA
GATTTGCCCG GCATGGGCAA AACCAGCCTG TCCCATGCCC TCGCCCAAAG CCTCGGCCTT
AGCTATCAAC GTGTTCAATT TACCAGTGAT ATGCTGCCCG CCGATATTCT CGGGGTATCG
ATTTTTGATA AACACCAAGC GCAATTTGTG TTTCATCCCG GCCCTATTTT TAAACAGATG
GTGCTGGCCG ATGAGATTAA CCGCGCCAGC CCTAAGACTC AGAGCGCTCT GCTCGAGGCA
ATGGCCGAGC AGCAAATTTC TGTCGATGGC GTCACCCACA GATTACCCAA TCCGTTTTTT
GTGATTGCCA CACAAAACCC CACGGAACAA TCGGGCACCT TTCCGCTGCC CGAATCCCAA
CTCGACCGCT TTATGATGCG GATTTCTATC GGTTATCCCA GCCATGATGC GGAGCTAGCA
ATGCTGAAAA GCGATCAAAC GCCGCAAACC CTCGATAATT TACCCCAATG TTTAACCCCG
CTGGCGTTAA CCCAGTTGCA GGAGCAATGC GACAAAGTCG CGGCGTCCGA TGCACTGCTC
AATTATGTCT TGGCCTTAGT GCATGACTCG CGCAATCAAA CCGATGCCGT CGGCCTATCG
CCCCGCGCAA CCAAAGCCCT ATTGCAAGCC GCTAAAGCAT GGGCATTTTT AGAGGGCAGA
CACTATTTAG TCCCCGAGGA TGTGCAAGCG GTGTTTTGTA GCGTGGCCGA ACATCGACTG
CGTACCAGCA GCCAATTGCA GGGGGAAGCG CTATCGGAGC GGATCCTCGC CAGCGTCAAT
CCCATCATGT AA
 
Protein sequence
MAHSGLSQLL QQLEQVLLGK PRQIRLALAC ILARGHLLIE DLPGMGKTSL SHALAQSLGL 
SYQRVQFTSD MLPADILGVS IFDKHQAQFV FHPGPIFKQM VLADEINRAS PKTQSALLEA
MAEQQISVDG VTHRLPNPFF VIATQNPTEQ SGTFPLPESQ LDRFMMRISI GYPSHDAELA
MLKSDQTPQT LDNLPQCLTP LALTQLQEQC DKVAASDALL NYVLALVHDS RNQTDAVGLS
PRATKALLQA AKAWAFLEGR HYLVPEDVQA VFCSVAEHRL RTSSQLQGEA LSERILASVN
PIM