Gene Shewmr4_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1760 
Symbol 
ID4252334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2087794 
End bp2088786 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content46% 
IMG OID638118371 
Producthypothetical protein 
Protein accessionYP_733891 
Protein GI113970098 
COG category[R] General function prediction only 
COG ID[COG1054] Predicted sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0425355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACG TTGTTGTTTG TGCTTTATAT AAGTTTGTTT CATTACCGCA TTTTGAGTCG 
CTGCGTGAGC CACTCCTGTC CATGATGGAA CAGGCCGAGA TTAAAGGCAC ATTGTTGCTG
GCAAGTGAGG GGATTAACGG CACTGTGGCC GGCACTCAAG CGGCTATCGA CGCACTGCTG
GCTTGGCTGA ATAACCAAAA TGGCCTTGAA AACATCGTTT ACAAGTTATC TTTTGACGAC
GAAATGCCTT TCTACCGCAC TAAGGTGAAG CTGAAAAAAG AAATCGTCAC CATGGGCGTC
GAGGGTATCG ATCCGCTTAA AGTGGTCGGC ACCTATGTAA AACCACAGGA CTGGAACGCG
CTGATTTCCG ATCCTGAAGT CATCCTAGTG GATACCCGCA ACGACTATGA AGTGCAAATC
GGCACCTTTA AAAATGCCAT TAACCCAGTG ACCGAAACCT TCAGAGAATT CCCTGATTAT
GTGAAGCAGA ATCTCGATCC TGCCAAGCAT AAAAAAGTCG CGATGTTCTG TACTGGCGGT
ATTCGCTGCG AAAAATCGAC CGCTTATTTA AAAGAGCAAG GCTTTGAAGA AGTTTATCAC
CTCGAAGGTG GCATCCTTAA ATACCTCGAA GAGGTAAAAC AGGAAGAAAG CCTGTGGGAA
GGCGAATGTT TCGTCTTCGA TAACCGCGTC GCCGTTGACC ATGATTTGAA GAAAGGCCAA
TACGATCAAT GTAATGCTTG TCGTATGCCG ATCACTGAAG CCGAAAAATT AAGTCCAGCC
TATGTGCAAG GTGTTAGCTG CCCACATTGT ATCGATAAGA TTTCAGACGA GCAGCGTAAG
CGTTTCGTTG AACGTGAGCG CCAAGTAAAC TTAGCGAAAT CACGTAACGA AGCACACATT
GGTAGTGATG TGAATCAAGT GATTGAAGCT CGTCGTCAAA AGAAAGAAGC ACTGCGCCAG
CAATCGGCTG AAAAGAACAA GGCTAAGCAA TAA
 
Protein sequence
MSNVVVCALY KFVSLPHFES LREPLLSMME QAEIKGTLLL ASEGINGTVA GTQAAIDALL 
AWLNNQNGLE NIVYKLSFDD EMPFYRTKVK LKKEIVTMGV EGIDPLKVVG TYVKPQDWNA
LISDPEVILV DTRNDYEVQI GTFKNAINPV TETFREFPDY VKQNLDPAKH KKVAMFCTGG
IRCEKSTAYL KEQGFEEVYH LEGGILKYLE EVKQEESLWE GECFVFDNRV AVDHDLKKGQ
YDQCNACRMP ITEAEKLSPA YVQGVSCPHC IDKISDEQRK RFVERERQVN LAKSRNEAHI
GSDVNQVIEA RRQKKEALRQ QSAEKNKAKQ