Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1755 |
Symbol | |
ID | 4252329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2083330 |
End bp | 2085087 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118366 |
Product | sulphate transporter |
Protein accession | YP_733886 |
Protein GI | 113970093 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.42576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTTTC CCAGTTTAGT ATCGTTAATG CCCGGCTTGG CGCAGATGCT GCAGTATGAG AAGCAATGGA TCAGGGATGA TGTGAGGGCG GGATTATCCG TGGCGGCGGT CGCTTTACCC GTTGCCATTG CCTACGCCCA ATTGACCGGG GTCAATGCCG CTGTCGGTTT ATACTCCTGT GTGCTGCCCA TGTTGGTGTA TGCACTGTTT GGCACTTCTA GACAATTAAT TGTTGGACCC GATGCCGCCA CCTGCGCAGT GATTGCCGCC GTGGTGACGC CGCTTGCCGC GGGTGACAGC ATGAAGCACT GGCAACTGGT AATGACCATG ACGGCGATGA CCGGTTTTTG GTGTTTAATC GCCAGTCGTT TCCGCCTTGG GGTATTAGCA GACTTTTTAT CAAAACCTAT CCTGATGGGG CTGCTCAATG GTGTGGCTAT CACCATTATT GTCGGTCAAT TCTCGAAAAT TTTTGGTTTC ACCTTCGATG AGCGTTATTT AATTGAGCGA TTAACTGGTG CGCCATCCTA TTTGACCAAG ACTCACTGGC CCACGTTATT GATGGGGGTT GTGACCTTAG CGACCTATGC GTTGGTAAAA CGTTATCGCC CTCTGTGGCC CGCCTCTATG TGTGCGATGG CGATGGCAGC ATTTTTAGTG TGGGCCTTTA ACTTAACCAG TTTTGATATC AATGTGGTGG GTGAGGTGAG CGCTGGTTTA CCCTCGTTCC AAGCGCCAGC ATTCGATCTC GGTATTGCCC GTGAATTGGT GGTGCCTGCA CTCAACTTAG CCATGGTGAG CTTTGTCAGT ATGATGCTGA CAGCGCGCAG TTTTGCAGCA AAAAACGGTT ACGATATCGA TGCAGATAAA GAGTTTCGCG CCTTAGGGAT CGCGAACATC GCTTCTGCCT TATCCCAAGG TTTTGCGGTC AGCGGCGCCG ATTCGCGCAC TGCGGTTAAC GATGCTAACG GCGGTAAGAG CCAGTTGGTG TCCATCATCG CGGCGGTTTT GATTGCATTA GTCGCACTGT TTTTTACCGC ACCGCTCAAA TATATCCCCA GTTCTGCGCT CGGCGTTGTA TTGGTGATCG CTTCGATTTC ATTGATTGAT CTAAAGGCGC TGTGGAACCT GCGCGTAAGA GACCGCTCCG CCTTTTTACT CGCCTGTACG ACTTTGTTTT CTGTGCTGTT TATCGGGGTG ATCCCTGGTA TCACCTTGGC GGTATTGCTG GGCCTATTCC AGTTTTTAGC CACAGTGATG CGCCCAACCG ACCAAGTGCT TGGGCTTGAC CAAAAAGGGG TTATTCGCAG TGTGGATGAT TCGGGTAAGG CCAAATCTGT GCCCGGCGTG TTTATTTATC GTTTCAACTC GCCGTTAACC TACTTCAACG CCACTTACTT TAAGCGCCGC TTACTGGAGA AGTTTATCCG TGAGCCTGAG CCCGTGGATT GCATTATCAT CGATGCCGTC CCGTGTTTTA CTCACTTAGA TTTGAGTGTG ATGGCCATGC TTGCGGATTT GCATCAATTA TTGAAGAAGC GCGGCATACG TTTAGTGTTA GCAGGGCGTA AGCGGCAGAT GCTCGGCTGG TTTGAACAGG CGGGAATGCA GTCTGGTGAG GGCGGTATTT TGATCCGACC CGATTTATAT CTGGCGCTAA AAATGAACCA AAGCTACAAG CAAGCGTTAG CCGAAGGCCA GGCGCCGGTG ATCAAAAAAG CGCCCGAGGA TGATGTGCTA CTACACAGTC ATTTGTAA
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Protein sequence | MKFPSLVSLM PGLAQMLQYE KQWIRDDVRA GLSVAAVALP VAIAYAQLTG VNAAVGLYSC VLPMLVYALF GTSRQLIVGP DAATCAVIAA VVTPLAAGDS MKHWQLVMTM TAMTGFWCLI ASRFRLGVLA DFLSKPILMG LLNGVAITII VGQFSKIFGF TFDERYLIER LTGAPSYLTK THWPTLLMGV VTLATYALVK RYRPLWPASM CAMAMAAFLV WAFNLTSFDI NVVGEVSAGL PSFQAPAFDL GIARELVVPA LNLAMVSFVS MMLTARSFAA KNGYDIDADK EFRALGIANI ASALSQGFAV SGADSRTAVN DANGGKSQLV SIIAAVLIAL VALFFTAPLK YIPSSALGVV LVIASISLID LKALWNLRVR DRSAFLLACT TLFSVLFIGV IPGITLAVLL GLFQFLATVM RPTDQVLGLD QKGVIRSVDD SGKAKSVPGV FIYRFNSPLT YFNATYFKRR LLEKFIREPE PVDCIIIDAV PCFTHLDLSV MAMLADLHQL LKKRGIRLVL AGRKRQMLGW FEQAGMQSGE GGILIRPDLY LALKMNQSYK QALAEGQAPV IKKAPEDDVL LHSHL
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