Gene Shewmr4_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1749 
SymbolilvH 
ID4252323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2074674 
End bp2075168 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content50% 
IMG OID638118360 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_733880 
Protein GI113970087 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.306169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAA TTATATCTGT ATTACTCGAA AACCAATCCG GCGCTTTATC TCGTGTTGTC 
GGGCTGTTTT CCCAGCGCGG TTACAACATT GAAAGTTTAA CTGTGGCACC AACCGATGAT
AACACCTTAT CGCGCCTAAA CATTACCGTG GTGGCCGACG AAAAAGTGCT AGAGCAAATC
GAGAAACAGC TGCACAAGTT AGTCGATGTG CTTAAGGTGT CAAATGTCAC CGAATCGGCT
TATATCGAGC GGGAGTTGGC ACTGGTTAAA GTCCGCGCCC AAGGGGAATT ACGGGAAGAA
ATTAAGCGTA CCGCCGATAT CTTCCGTGGG CAAATTGTCG ATGTCACCGC CAATCTCTAC
ACCATTCAAT TGGTGGGCAC GACCGAAAAG CTCGACGCCT TTATTCACTC CATGGGTGAA
GTGACCAAGG TAGTTGAAGT GTCACGCTCG GGCGTTGTGG GTCTGGCCCG AGGCGAGAAA
GCGATGAGAG CCTAG
 
Protein sequence
MRRIISVLLE NQSGALSRVV GLFSQRGYNI ESLTVAPTDD NTLSRLNITV VADEKVLEQI 
EKQLHKLVDV LKVSNVTESA YIERELALVK VRAQGELREE IKRTADIFRG QIVDVTANLY
TIQLVGTTEK LDAFIHSMGE VTKVVEVSRS GVVGLARGEK AMRA