| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1739 |
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| Symbol | |
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| ID | 4252313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2066660 |
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| End bp | 2067874 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118350 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_733870 |
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| Protein GI | 113970077 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000125789 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCCACCACGC CAGTTGATCC GCGAGTCGCG
GAAAAAATGT TCCAATACAT GACGATGGAT GGCATCTTCG GTAACCCAGC ATCACGTTCA
CACCGTTATG GCTGGCAAGC GGAAGAAGCG GTCGATGTGG CTCGCAACCA AGTGGCAGAG
CTTATCAATG CCGATCACCG TGAAATCGTG TTTACCTCAG GTGCAACCGA ATCAAACAAC
CTGGCAATTA AAGGTGTAGC GCATTTCTAT AATAAGAAAG GCAAGCACAT CATCACCAGC
AAGACTGAAC ACAAAGCAGT ACTGGATACC TGCCGTCAGC TTGAGCGCGA AGGCTTTGAA
GTGACCTATT TAGAGCCTGA AGCCAACGGT ATCATTCCGA TGGAACGTTT AGAAGCCGCG
ATGCGTGACG ACACTATTCT TGTCAGCATC ATGCACGTCA ACAACGAAAT AGGTGTGATC
CACGATGTGG ATGCCATCGG CGAGTTATGC CGCTCAAAAG GCATTATTTT CCATATGGAT
GCGGCACAAA GCGCGGGCAA ATTACCTATT GATGTACAAA CCACTAAGGT TGACCTGATC
TCTATTTCTG GCCACAAAAT GTATGGTCCA AAAGGGATTG GTGCTCTGTA CGTTCGTCGT
AAGCCACGTA TTCGCTTAGA AGCGCAAATG CACGGCGGTG GTCATGAGCG TGGTATGCGC
AGTGGTACTC TGGCGACTCA TCAAATTGTT GGTTTAGGTG AAGCGGCGGC GATTGCAAAA
GCTGAAATGG CTACGGACAA CGCCCGTATC GCTAAGCTGC GTGACAAGTT ATGGAATGGC
ATCAAACATA TCGAAGAGAC GTATGTAAAC GGCGATATGA CTCACCGTGT GAGTGGCAGC
CTGAACGTCA GCTTCAACTA TGTTGAAGGT GAGTCGCTGA TGATGGCATT AAAAGATTTA
GCGGTTTCAT CGGGTTCTGC CTGTACGTCA GCCAGTCTCG AGCCAAGCTA CGTGTTACGT
GCGCTCGGTT TAAATGATGA AATGGCGCAT AGCTCAATTC GTTTCTCAAT CGGTCGTTTT
ACCACCGAAG AAGAAATCGA CCACGCTATC GAAACTATTA CACAATCTAT TGATAAATTA
AGAGAAATGT CTCCATTGTG GGAGATGTTC AAAGATGGCA TCGACCTGAA TCAGGTGCAG
TGGGCACATC ATTAA
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| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMFQYMTMD GIFGNPASRS HRYGWQAEEA VDVARNQVAE
LINADHREIV FTSGATESNN LAIKGVAHFY NKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLEPEANG IIPMERLEAA MRDDTILVSI MHVNNEIGVI HDVDAIGELC RSKGIIFHMD
AAQSAGKLPI DVQTTKVDLI SISGHKMYGP KGIGALYVRR KPRIRLEAQM HGGGHERGMR
SGTLATHQIV GLGEAAAIAK AEMATDNARI AKLRDKLWNG IKHIEETYVN GDMTHRVSGS
LNVSFNYVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTEEEIDHAI ETITQSIDKL REMSPLWEMF KDGIDLNQVQ WAHH
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