| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1733 |
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| Symbol | |
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| ID | 4252307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2061083 |
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| End bp | 2061844 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118344 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_733864 |
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| Protein GI | 113970071 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000305672 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.724903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAG ACGTGTCTGG ACATGGAGTT TATCCATGTC ATTTAGAATC AATAGCGAGA
ATCTCAATGC AAGACGTGTT ACTGCAAGTG CAGGCGGTGA GTAAGAGTTA TCACGATGGC
GATGTGACCA CTCAGGTGTT GACTGAGGTG GATTTACAGG TATTTAAGGG GGAGCAACTG
GCGATTGTCG GTACCTCTGG CTCGGGCAAG AGTACGCTGC TGCATATTAT GGGCACCTTA
GATAAACCTT CTGCCGGCAA AGTATTGTTA GCGGGTGAGG ATTTATATCA GGTGAGCAGT
GCCCGTCAGG CGCAGATCCG CAACCAAGAT TTAGGTTTTA TCTATCAGTT CCATCACCTT
TTGCCTGAAT TTAGTGCGCT GGAAAACGTG GCTATGCCAG CGTTTATTCA AGGCACAGAT
CGCGCTCAGG CTCAGGCCGA TGCCAAAATG TTGCTCGAAA GAGTAGGGCT TGGGCACAGA
ATGAGCCATA TTCCCGCCGA GCTTTCGGGC GGTGAGCGTC AACGGGTGGC AATTGCCCGG
GCGCTGATCA ACAAACCCAA ACTCGTACTG GCCGATGAAC CGACGGGAAA CCTCGATGCC
AAGAGCGGCG AGGCGGTCTA TGAGCTGATC CGCGAATTAG CCAATCAACT CGGAACGGCG
TTTGTGGTGG TGACTCACGA TCCTAAATTA GCGGCGCGGA TGGACAGACA ACTCACCATG
AAGAATGGTT ATCTGCAAGC TGTTGCGGAA CACGCCCAAT GA
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| Protein sequence | MMRDVSGHGV YPCHLESIAR ISMQDVLLQV QAVSKSYHDG DVTTQVLTEV DLQVFKGEQL
AIVGTSGSGK STLLHIMGTL DKPSAGKVLL AGEDLYQVSS ARQAQIRNQD LGFIYQFHHL
LPEFSALENV AMPAFIQGTD RAQAQADAKM LLERVGLGHR MSHIPAELSG GERQRVAIAR
ALINKPKLVL ADEPTGNLDA KSGEAVYELI RELANQLGTA FVVVTHDPKL AARMDRQLTM
KNGYLQAVAE HAQ
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