Gene Shewmr4_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1682 
Symbol 
ID4252258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand+ 
Start bp1992499 
End bp1993032 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content43% 
IMG OID638118294 
Producthypothetical protein 
Protein accessionYP_733815 
Protein GI113970022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0455206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0971581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTAT TGCCACAAAA GGATTGGCAC TGGAAATATA ACGATTCGTA CGGTGTATTA 
GGCGTTTCGT TAGGTTCCGA GATAGAATTT CTGACGGCTT ATAAAGCAAA ATCATTAATT 
CCTGATGCCT TATCAAGCAT GGAATTTAAT ATTGCGCACG CCAAATTCTA TATGAGCTTG 
CTCGACAAGT TGCCGAAAAC CTTATCCCTT ACCGATGCCG CCATAGTGCA AATCGCCTTA 
AATGCGACAG CCGCGCATTT TATGCTGACA CCGCAAATGC CTAAATCATG GTTTTTTGAT 
TGCAGCGATG TATGCGTATT TAGCGATGTG GGTAAAGTCT TTGAGCTTAA ATGCCAAAAA 
CAACGGGCTT TAGTCTTAGT CATCGAAAAC ACCCTACAAT CCGCGTTGGT GATGTTATTA 
TCGCCAGAAT GTGTGTTATC AGGCGCTAAA ACCATGACGC AATTTGAAAC TATTAAGGTG 
ATGCACAATC GCTTGCACCC ATTAAGGGTA CAGCGCCATG TCGTCGCAGC CTAA
 
Protein sequence
MLLLPQKDWH WKYNDSYGVL GVSLGSEIEF LTAYKAKSLI PDALSSMEFN IAHAKFYMSL 
LDKLPKTLSL TDAAIVQIAL NATAAHFMLT PQMPKSWFFD CSDVCVFSDV GKVFELKCQK 
QRALVLVIEN TLQSALVMLL SPECVLSGAK TMTQFETIKV MHNRLHPLRV QRHVVAA