| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1661 |
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| Symbol | tmk |
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| ID | 4252237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1961547 |
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| End bp | 1962176 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118273 |
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| Product | thymidylate kinase |
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| Protein accession | YP_733794 |
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| Protein GI | 113970001 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.159329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAAG CATCCGCCAA ATTCATCGTT GTTGAAGGAC TGGAAGGCGC AGGCAAATCG
AGTGCGATTG CCCTTATTCG CGATTTTATT GAAAAGCATA CTGGGCTCGC ACCCGTATGC
ACCCGTGAGC CAGGCGGTAC GCCACTGGCC GAGCGCATTC GTGACTTAGT AAAAATTGCT
GACCCAAGCG ATCCTCTATG TGATGAGTCC GAATGTTTAT TGATCTATGC CGCCAGAGCT
CAGCTCGTCG CCAATGTGAT CAAACCTGCG CTTGCAGAAG GCAAGTGGGT GTTAGGGGAT
AGGCATAATT TGTCGTCCTT AGCTTACCAA GGCGGTGGAC GCGGCTTAAT GCCCTTAGTC
GAAGCCGTGA GTAACGCGAC GCTCAAAGGC TTCAAACCCG ATTTAACCCT CTATCTTGAC
CTTGATCCTA AGCTTGGGCT GCAGCGCGCA GCAAAGCGGG GCGAGCTTGA TAGAATCGAG
CAACAAGCCA TCGATTTTTT TGAACGGGCG CGCGCAACTT ACCTCAAGCT TGCCAGCGAA
GATGAGCAGA TTGTCGTTAT CGATGCCAGT CAAACCATGG CCGAAGTGCA TAAAGATATT
CTGGCCGTGT TACAGGCGAT GGCATGGTAA
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| Protein sequence | MTQASAKFIV VEGLEGAGKS SAIALIRDFI EKHTGLAPVC TREPGGTPLA ERIRDLVKIA
DPSDPLCDES ECLLIYAARA QLVANVIKPA LAEGKWVLGD RHNLSSLAYQ GGGRGLMPLV
EAVSNATLKG FKPDLTLYLD LDPKLGLQRA AKRGELDRIE QQAIDFFERA RATYLKLASE
DEQIVVIDAS QTMAEVHKDI LAVLQAMAW
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