Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1660 |
Symbol | |
ID | 4252236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1960540 |
End bp | 1961550 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118272 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_733793 |
Protein GI | 113970000 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.132451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TCATTCTGAT CGCAAGTTCT ACTTTGTTGA CCTTGCTGAC CTTAGCTTGT TTGGTTGGTT ATTGGGGCTA TCGAACGATA ATTGATTACA GCCAAACCCC CTTAGTCCTA ACCGAAGCCA AAGAATTAAC CATTGCCCGT GGCACCAGCG TGCACCAGTT GGCCCAACAG TTAGAAACCG ATGGTGTTAT CCAAGACAAA TGGAAACTCA AATGGTTACT AAGATTGCGC CCAGAGCTGG CGAAGATCCG TACCGGTCTT TACGAGATGT CTCCTTCGCA GTCGATTGCC GACTTACTCA ACGATTTAGT TAATGGCAAG GTGAAAACCT TTAGCCTGAC TTTAGTCGAA GGCAAAACCA TTGCCGAGTG GGAACAACAG CTTGCGAGTG CGCCGCACTT ACAGTTGTCC CCCGAGGTCT TTAGTGCGGT ATTGATGGAG CAGGGCGATG ATTCGGCGTT GCCTGAGGGT AAGTTCTTCC CCGATACTTA TCATTACACC GCCGATAGTG ATGCTAAGAC GCTGCTCACC CAAAGTTATA AGATGATGGA GCAGGAGCTT GCCAAAGCAT GGGCGGAGCG TGTGCCCGGT TTACCACTCA AATCGCCCTA CCAGATGCTG ATCTTGGCCT CGATTGTGGA GAAAGAAACA GGCCAAGCCT TCGAGCGCGA TCAAATCGCC GGTGTCTTTA TCAATCGACT CAATCTGGGG ATGAAGCTGC AAACCGATCC AACGGTCATT TATGGCATGG GTGACAGATT TAAAGGCAAT ATCACCCGTA AAGATCTCGT CGAAGAGACA CCCTTTAACA CTTACCGGAT TTTCGGCTTA CCGCCAACGC CGATTGCTGC GCCGAGTAAG GCCTCATTGC AGGCGGTGTC TAAACCTGCC AAGGTCAGTT ATTTGTATTT TGTGTCGCGC AACGATGGCA CCCATGTGTT TTCCACCACC TTGGAAGAGC ATAACCGCGC CGTCGATATT TATCAGAGAA AGAAAAAATG A
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Protein sequence | MKKIILIASS TLLTLLTLAC LVGYWGYRTI IDYSQTPLVL TEAKELTIAR GTSVHQLAQQ LETDGVIQDK WKLKWLLRLR PELAKIRTGL YEMSPSQSIA DLLNDLVNGK VKTFSLTLVE GKTIAEWEQQ LASAPHLQLS PEVFSAVLME QGDDSALPEG KFFPDTYHYT ADSDAKTLLT QSYKMMEQEL AKAWAERVPG LPLKSPYQML ILASIVEKET GQAFERDQIA GVFINRLNLG MKLQTDPTVI YGMGDRFKGN ITRKDLVEET PFNTYRIFGL PPTPIAAPSK ASLQAVSKPA KVSYLYFVSR NDGTHVFSTT LEEHNRAVDI YQRKKK
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