Gene Shewmr4_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1649 
SymbolinfA 
ID4252225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1950859 
End bp1951077 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content46% 
IMG OID638118261 
Producttranslation initiation factor IF-1 
Protein accessionYP_733782 
Protein GI113969989 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000121348 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG AAGATAACAT TGAAATGCAA GGCACTATCC TTGAAACCTT GCCAAACACA 
ATGTTTCGCG TAGAGCTTGA AAATGGTCAT GTGGTGATAG CCCACATTTC AGGCAAAATG
CGCAAAAACT ACATCCGGAT CCTGACTGGC GACAAAGTAA CAGTCCAGCT GACCCCTTAT
GATCTGACCA AAGGTCGTAT TGTCTTCCGC GCACGCTAA
 
Protein sequence
MAKEDNIEMQ GTILETLPNT MFRVELENGH VVIAHISGKM RKNYIRILTG DKVTVQLTPY 
DLTKGRIVFR AR