Gene Shewmr4_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1640 
Symbol 
ID4252216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1943415 
End bp1943912 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content47% 
IMG OID638118252 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_733773 
Protein GI113969980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000035189 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATAG AGACAGAGCG TTTAATACTC AGACCATTTA CCGAGCAGGA TATCGATGCC 
CTCTACGTAA TGAATAGCAT TCCTGAGATG CTTAAATACA TTCCTGTTGC GCCGTTTACT
GCTCCAGAGC AGGCGCGGGA GCTGTTCCAT AACGTAATTT TGCAGGATTA TCAGCAACGG
GGATTCGGCC GCTGGGCCGT CGAGCATAAG GCTGATATGA AGGTGATTGG TTTTTGTGGA
CCTAAGTTTA TTCCCGAATA TAACGAAGTC GAAATTGGCT ATCGTTATTT TCCCGAGTAT
TGGGGCAAGG GGATTGGTAC CGAGGCTGCT CAAGCTGCAA TCAGCGTGTT CCCGCAGTTT
GGCATTACGC AAATCATTGC ATTGATCCTA GAGGGGAACA TTGGCTCTGA GGGTGTAGCT
AAACGCATAG GAATGCATTG GCGTGAACCT AGCGAATTTA TGGGGCATAA AGTGAATGTG
TACGCGAAGG TGCTCTAA
 
Protein sequence
MIIETERLIL RPFTEQDIDA LYVMNSIPEM LKYIPVAPFT APEQARELFH NVILQDYQQR 
GFGRWAVEHK ADMKVIGFCG PKFIPEYNEV EIGYRYFPEY WGKGIGTEAA QAAISVFPQF
GITQIIALIL EGNIGSEGVA KRIGMHWREP SEFMGHKVNV YAKVL