Gene Shewmr4_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1631 
Symbol 
ID4252207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1932919 
End bp1933314 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content47% 
IMG OID638118243 
Productsuccinate dehydrogenase subunit C 
Protein accessionYP_733764 
Protein GI113969971 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.02193e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGA GTGAGCAGAA CGTGAAAAAG CAAAGACCTG TCCATTTAGA TCTGCAGACC 
ATTCGCTTTC CTGCAACAGC GATTGTGTCA ATTCTTCACC GTGTATCCGG TGTCATCATG
CTGTTCGCTG TTGGCATTCT TATTTGGTTG CTAAATTCAT CTTTAGCCTC CGCTGAAAGT
TTCGCAGGCG TACAATCTCT GTTTGATAAC TTCGTCGTGA AGTTCATCAT GTGGGGCATT
TTGACTGCAC TGGCTTATCA CTTATTCGGT GGCCTACGCC ACTTAGTAAT GGATACCGGT
CGTTGGGAAG AGTTGGCTTC GGGCACCGCC TCAGCGAAAG CTGTATTTGT ACTGACGGTA
GCCTTTTCAA TTTTAGCGGG GTTATGGGTA TGGTAA
 
Protein sequence
MELSEQNVKK QRPVHLDLQT IRFPATAIVS ILHRVSGVIM LFAVGILIWL LNSSLASAES 
FAGVQSLFDN FVVKFIMWGI LTALAYHLFG GLRHLVMDTG RWEELASGTA SAKAVFVLTV
AFSILAGLWV W