Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1630 |
Symbol | gltA |
ID | 4252206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1931216 |
End bp | 1932502 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118242 |
Product | type II citrate synthase |
Protein accession | YP_733763 |
Protein GI | 113969970 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.01465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TAAAAGCCAA ATTAGAATTA CCAGGGAACG ACTCGATAGA ATTGCCAGTA AAGCAAGGAT CCGCTGGTTT TGACGTAATC GATATCAGTA AACTTGGCAG CAAGGGTTAC TTCACTTTTG ATCCAGGTTT TCTCGCGACA GCCTCCTGTG AATCTGCAAT TACCTATATC GATGGCGATC AAGGTATATT GTTACACCGC GGCTATCCAA TCGAGCAACT CGCCGTTGAC TCAGATTACT TAGACCTGTG TTACCTGCTG CTTTACGGTG AACTGCCGAC GAAAGAGCAA TATGCTGAAT TTGTACACAC AGTAAAAACC CACACTATGG TTCATGAGCA ACTCGCCTTC TTCTTTAGAG GTTTCCGTCG TGATGCTCAT CCTATGGCGA TGTTATGTGG TGTCACTGGT GCATTGTCTG CATTTTATCA AGACTCACTC GATGTCAACG ATCCTCGCCA CCGCGAAATC GCCGCTTATC GCCTAGTCTC CAAAATGCCA ACGATTGCCG CTATGTGCTA CAAGTACTCT TCTGGCCAGC CATTCGTTTA TCCACGCAAT GACTTAAGCT ACGCAGGCAA CTTCTTAAGC ATGATGTTTG CCGTTCCTTG CGAAGAGTAC AAGGTAAACC CAATCGTTGA ACGTGCTATG GATCGTATCT TCATTCTACA TGCGGATCAC GAACAAAACG CGTCAACGTC AACCGTACGT TTAGCCGGTT CTTCAGGCGC GAATCCATTC GCGTGTATCG CTGCGGGTAT TGCTTCTCTA TGGGGCCCTG CACACGGCGG CGCGAACGAA GCTTGTCTAC AAATGTTAGA AGAAATCGGT TCAGTGGACC GTATTCCTGA ATTCATCGCC CGTGCGAAAG ACAAGAACGA CCCATTCCGT CTGATGGGCT TCGGACACCG TGTTTACAAA AACTTTGACC CACGCGCCAA AGTCATGCGT GAAACCTGTC ACGAAGTGTT AAAAGAGCTG AAAGTACAAG ATCCATTATT AGATGTTGCG ATGGAACTTG AGCGTATCGC ATTGGAAGAC GAGTACTTCA TTTCGAAGAA ACTCTATCCA AACGTCGATT TCTACTCTGG CATCATCATG AAAGCCATTG GTATTCCAAC TAGTATGTTC ACTGTACTGT TTGCATTAGC ACGTACTGTG GGTTGGATTG CTCACTGGAA AGAAATGTTG GATCAACCTG GTCACAAGAT CAGCCGTCCA CGTCAGCTAT ATACTGGCGA GACTGCGCGT GACTTCGTTA GCCAAGATAA ACGCTAA
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Protein sequence | MADLKAKLEL PGNDSIELPV KQGSAGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI DGDQGILLHR GYPIEQLAVD SDYLDLCYLL LYGELPTKEQ YAEFVHTVKT HTMVHEQLAF FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDPRHREI AAYRLVSKMP TIAAMCYKYS SGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIVERAM DRIFILHADH EQNASTSTVR LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLQMLEEIG SVDRIPEFIA RAKDKNDPFR LMGFGHRVYK NFDPRAKVMR ETCHEVLKEL KVQDPLLDVA MELERIALED EYFISKKLYP NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGETAR DFVSQDKR
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