| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1629 |
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| Symbol | |
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| ID | 4252205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1929855 |
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| End bp | 1930931 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118241 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_733762 |
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| Protein GI | 113969969 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.185382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGT CAAAAATTGC TAAGTTCGCC CTACCCGTGC TGTTAGTGTC AATGTTAGCG
GCATGCGGCG AAGAGGAAGT GGCTAAAAAA GAAGAACAAT ATGCCATCCC CGTCGAAACC
ACTACCGTAC TGCAGGGTAA TGTGTCTTCG TTTTATAGCA CTACGGCGAC CCTCGAAGCT
CCGCAGGAAG CCAATGTCGT CAGCCGCATT GCCGGCCTTA TCGAAGCCAT TAATGTCGAA
GAAGGTGACC GGGTACAAAA AGGTCAAATC CTCGCGGTTA TCGATGCTAA ACGTCAGCAA
TACGATCTCG ACCGCTCCGA AGCCGAAGTG AAAATCATCG AGCAAGAGTT AAACCGCTTA
AAGAAAATGA GCAACAAAGA GTTTATCAGT GCCGACTCGA TGGCCAAGCT TGAGTACAAC
CTACAGGCCG CTATCGCCAA ACGCGATCTT GCCGAACTAC AAGTCAAAGA AAGCCATGTG
GTCTCCCCCA TCAATGGCAT TATTGCTAAG CGTTATGTGA AGGCTGGTAA CATGGCGAAG
GAGTTTGGGG ATCTGTTTTA TATCGTCAAT CAAGACGAGC TGCACGGGAT TGTGCATTTA
CCCGAGCAGC AATTAACTAG CCTGCGTTTA GGCCAAGAAG CCCAAGTCTT TAGTAATCAG
CAGAGTAAAA ACGCTATCCA CGCGAAAGTA TTGCGGATAA GCCCAGTGGT CGACCCACAG
AGCGGCACCT TTAAAGTGAC GTTAGCCGTA CCGAATCAGA ATGCCCATTT AAAGGCCGGT
ATGTTCACTC GGGTCGAATT GAAGTATGAC ACCCATGAAA ATGTAATCAC TGTGCCCTAC
AGCGCCCTGA TCAACCAAGA CAACAAACAA GCCCTGTATG TGATTGATGG CACGAGCGCA
GATCATCGCG CCAACCGCCG TGAAGTCGAA ATTGGTTACC GTGAAGGCGA CGCGGTGGAA
GTGGTCTCCG GCCTCAAACC CGGCGAGCAA GTCGTGACCC GTGGCCAGCA AAATTTGAAA
GACCAATCCT TAGTTGAAGT CATTACCCCA CTCGATTTGG CCTCAGCGAA GAACTGA
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| Protein sequence | MEKSKIAKFA LPVLLVSMLA ACGEEEVAKK EEQYAIPVET TTVLQGNVSS FYSTTATLEA
PQEANVVSRI AGLIEAINVE EGDRVQKGQI LAVIDAKRQQ YDLDRSEAEV KIIEQELNRL
KKMSNKEFIS ADSMAKLEYN LQAAIAKRDL AELQVKESHV VSPINGIIAK RYVKAGNMAK
EFGDLFYIVN QDELHGIVHL PEQQLTSLRL GQEAQVFSNQ QSKNAIHAKV LRISPVVDPQ
SGTFKVTLAV PNQNAHLKAG MFTRVELKYD THENVITVPY SALINQDNKQ ALYVIDGTSA
DHRANRREVE IGYREGDAVE VVSGLKPGEQ VVTRGQQNLK DQSLVEVITP LDLASAKN
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