| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1606 |
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| Symbol | |
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| ID | 4252183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1901329 |
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| End bp | 1903554 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118219 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_733740 |
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| Protein GI | 113969947 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.601658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA ACTCACCAAC AATTATTTAT ACCGAAACCG ATGAAGCGCC AGCACTGGCA
ACGCTTTCTC TGTTACCTAT CATCAAAACC TTTACCGATG CGGCGGGTGT TGCGGTTGAA
ACCCGTGATA TTTCTTTATC GGGCCGTGTG ATTGCAAATT TCCCTGAAAA ACTGACTGAC
GCGCAAAAAA TTGGCGATCA CTTAGCTGAG CTGGGCGAAT TAGCCAATCA ACCTGAAGCA
AACATCATCA AACTGCCAAA CATCAGTGCC TCGATTCCGC AGTTAAAAGC CTGTATTTTA
GAGCTGCAAC AGAAAGGTTA CGACATTCCA AATTATCCTG ACGAGCCAAA GACTGACGAA
GAAAAGTCTA TCAAAGCCCG TTACGACAAG ATCAAAGGCA GTGCGGTAAA CCCAGTACTG
CGTGAAGGTA ACTCTGATCG CCGCGCGCCG CTTTCAGTGA AAAACTTCGC CAAGAAAAAC
CCGCACTCTA TGGGTAAATG GAGTAAAGAG TCACAATCTC ACGTTGCTCA CATGAGCGAA
GGTGACTTCT ACGGTAGCGA GCAGTCTGTG ACTCTGGCTA ACGCCGACAC AGTTAACATC
GTATTGTCGC AAAAAGACGG TCAAGACGTG GTATTGAAAT CTGGCCTGAA ACTGCTAGCT
GGTGAGATCA TCGACGCGTC AGTGATGAGC AAAAAAGCCT TAGTGAGCTT CTTTGAGCGT
GAAATCTCCA ATGCCAAGGC CGAAAACGTG TTGTTATCAC TGCACCTTAA AGCCACCATG
ATGAAAGTGT CTGATCCCAT TATGTTCGGC CACGCAGTGA AAGTGTTCTT CAAACCTGTG
TTTGATAAAC ATGCGTCATT ATTTGCTGAG CTAGGCGTTG ATGTGAACAA CGGCTTTGGC
GATGTATACG CCAAAATCGC TGGTTTACCC GCCGATGTCC GTGCACAAAT TGAAGCCGAT
ATCGCTGCTG TTTATGCTGA GCGCCCAGCG CTGGCGATGG TGGATTCTGA TAAAGGCATC
ACCAACTTAC ACGTACCAAG CGACATCATT ATCGATGCTT CTATGCCTGC GGCGATTCGT
TCATCAGGCC AAATGTGGGG CCCTGATGGC AAGTTGCACG ACACTAAAGC GCTGATCCCA
GACCGTTGCT ACGCGGGTGT GTATCAAGAA ACTATCGCTT TCTGTAAAGA ACACGGAGCC
TTCGATCCAA GCACTATGGG CAGTGTGCCA AACGTTGGTC TGATGGCGCA AAAAGCCGAA
GAATACGGTA GCCACGATAA AACCTTCGAA ATCCCAGCCG ATGGCGTAGT TAACGTGATT
GATGCCAGTG GCAAAGTGTT AATGAGCCAC AACGTTGAAG CGGGCGATAT TTGGAGAATG
TGCCAAGTTA AAGATGCGCC AATTCGCGAC TGGGTGAAAT TAGCTGTACG CCGTGCACGC
TTAAGCAATA CTCCTGCGGT ATTCTGGTTA GATGCGAATC GTGCCCACGA TGCGCAGCTG
ATTGCTAAAG TGAAGCAATA TCTGCCTGAG CATGATACAA GCGGTTTAGA AATCAGCATC
ATGTCACCAG AAGAAGCGAC TCGTTTCTCA TTAGTGCGTA TTAAAGAAGG TAAAGATACT
ATTTCTGTTA CCGGTAACGT ACTGCGTGAC TACCTGACTG ACTTATTCCC AATTCTCGAA
CTGGGTACCA GTGCTAAGAT GCTGTCTATC GTGCCATTAA TGAATGGTGG CGGCCTGTTC
GAAACGGGTG CGGGCGGTAG TGCGCCTAAA CACGTACAAC AGGTTGAAAA AGAAGGTCAC
TTACGTTGGG ACTCTCTGGG TGAATTCCTG GCTTTAGCGG CTTCTTTAGA GCATTTAAGC
CAAACAGTGG GTAACCCTAA GGCACAAGTA CTGGCGGATA CTTTAGATCA AGCCATCGGT
CAGTTCTTAG ATAGCAATAA GTCGCCATCA AGACGCGTTG GTGAACTAGA TAACCGTGGT
AGCCATTTCT ATCTGGCGAT GTACTGGGCA CAAGCATTAG CTGCACAAAG CAAAGACGAG
CAGTTACAAG CTCACTTTAT TCCACTGGCT CACGCACTAG CTGCCAATGA GCAAGTGATT
GTTGCTGAGT TAAACAATGC GCAAGGTGCA CCAGTGGATT TAGGCGGTTA CTACCGTTTA
GATGCTGCAA AAGCTGAAAA AGCCATGCGC CCAAGTGAAA CACTGAACAA GTTATTAATT
GCTTAA
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| Protein sequence | MKDNSPTIIY TETDEAPALA TLSLLPIIKT FTDAAGVAVE TRDISLSGRV IANFPEKLTD
AQKIGDHLAE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP NYPDEPKTDE
EKSIKARYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWSKE SQSHVAHMSE
GDFYGSEQSV TLANADTVNI VLSQKDGQDV VLKSGLKLLA GEIIDASVMS KKALVSFFER
EISNAKAENV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHASLFAE LGVDVNNGFG
DVYAKIAGLP ADVRAQIEAD IAAVYAERPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGQMWGPDG KLHDTKALIP DRCYAGVYQE TIAFCKEHGA FDPSTMGSVP NVGLMAQKAE
EYGSHDKTFE IPADGVVNVI DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR
LSNTPAVFWL DANRAHDAQL IAKVKQYLPE HDTSGLEISI MSPEEATRFS LVRIKEGKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG
SHFYLAMYWA QALAAQSKDE QLQAHFIPLA HALAANEQVI VAELNNAQGA PVDLGGYYRL
DAAKAEKAMR PSETLNKLLI A
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