| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1592 |
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| Symbol | |
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| ID | 4252169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1881795 |
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| End bp | 1884164 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118205 |
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| Product | phosphoenolpyruvate synthase |
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| Protein accession | YP_733726 |
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| Protein GI | 113969933 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000471516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.38574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAAT ACGTACTCTG GTATCAGGAA TTAGGCATGG GTGACGTCAA CTTGGTTGGC
GGTAAAAATG CTTCTCTTGG CGAGATGATC AGCAATCTAG CTAATGCCGG TGTTCAAGTA
CCTGGCGGAT TTGCGACTAC TTCTTATGCG TTCAATGAGT TCCTTGAACA AAGTGGAGTA
AACCAGAAGA TTTATGACAT CCTAGCAACA TTGGATGTAG ATGATGTCAA TGCACTGGCA
CAAGTAGGTG CACAGATCAG ACAATGGGTT ATCGACACCC CGTTCCAACC AGCACTCGAG
CAAGCGATTC GTGAAGCTTA CGACAAACTT GCGGCTGAAA CGAGCGATGC ATCATTCGCG
GTTCGTTCTT CTGCCACCGC AGAAGATATG CCAGATGCTT CTTTTGCTGG TCAGCAAGAA
ACCTTCTTAA ACGTGAAAGG ATTTGACTCA GTACTCGTAG CCATTAAGCA CGTGTTTGCG
TCACTCTTTA ACGACCGTGC AATTTCATAC CGTGTTCACC AAGGTTATGA GCACCACGGT
GTTGCCCTGT CTGCCGGCGT ACAACGCATG GTTCGTTCAG ACAAAGCGGC ATCAGGTGTG
ATGTTCACCA TGGACACTGA ATCAGGCAAC AACGATGTGG TGTTTATCAC TTCATCTTTC
GGTCTGGGTG AAATGGTTGT TCAAGGTGCG GTAAACCCTG ACGAATTCTA TGTTCACAAA
CCCATCCTCA CTCAAGGCCA TAAAGCCGTT GTTCGCCGTA ATATCGGTAG CAAGCTCATC
CAGATGGTGT ATTCCGATGA TGCTTCTCAC GGCAAACAAG TGAAAATTGA AGACGTTGCT
GCTGAAAAAC GTCGTCAATT CTCTATCAAC GACGCCGAAG TGATGGAATT GGCTAAACAA
GCTATGGTTA TCGAAAAACA CTACGGTCGT CCAATGGACA TCGAGTGGGC AAAAGACGGT
AACGATGGCA AACTTTATAT CGTTCAAGCG CGTCCAGAAA CGGTTCGTAG CCGTGAAGAT
GTACAATTAA TTGAACGTTA CCACTTAAAG AGCCGTGGCG CGGTGATCTC TGAAGGTCGT
GCTATCGGTC ATAAAGTCGG TTCAGGTGTG GCTAAGGTAT TAACCTCTAT CGCGGATATG
GATCAAATCC AACCCGGCGA TGTGTTAGTA ACCGACATGA CTGACCCAGA TTGGGAACCT
ATCATGAAGC GCGCCAGCGC CATCGTGACT AACCGTGGCG GCCGTACCTG TCACGCGGCG
ATTATTGCCC GTGAATTAGG TGTACCAGCA GTGGTAGGTT GTGGTGACGT GACCGACCGC
ATCAAGAATG GTCAGTTAGT GACTGTTTCT TGCGCCGAAG GCGACACAGG TTACATCTAC
GAAGGTAAGC AAGAGTTCGA AGTGGTTTCA AACCGCGTTG ACGCACTGCC TGAATTACCG
ATGAAGATCA TGATGAACGT GGGTAACCCA GATCGCGCCT TCGACTTCGC TCGTTTACCA
AACGAAGGTG TGGGTCTAGC GCGTTTAGAA TTCATCATCA ACCGCATGAT CGGTATTCAC
CCGAAAGCGC TGCTTGAATT CAACCAACAA GACGCTGCGC TGCAGGAAGA AATCAACGAG
ATGATCGCAG GTTACGATTC TCCAGTTGAG TTCTACATTG CCCGCTTAGT CGAAGGTATC
GCCTCAATCG GTTCTGCTTT CTATCCGAAG AAAGTGATCG TGCGTATGTC AGACTTCAAG
TCTAACGAAT ACGCTAACTT AGTCGGTGGT GACCGTTACG AGCCAGAGGA AGAAAACCCA
ATGTTGGGCT TCCGTGGTGC GAGCCGTTAT ATCTCTGAAT CATTCCGCGA TTGTTTCGCG
TTAGAATGTG AAGCGATTAA ACGTGTTCGT AATGAGATGG GTCTGAAAAA CGTCGAAGTG
ATGATCCCAT TCGTACGTAC TGTTAAAGAA GCCGAGCAAG TGATTGGACT GCTGAAAGAG
CAGGGCTTAG AGCGCGGTAA AGATGGTCTA CGTGTCATCA TGATGTGTGA AGTACCGTCA
AACGCGCTGT TAGCGGATCA ATTCCTTGAG CACTTCGATG GTTTCTCTAT CGGTTCAAAC
GATTTAACTC AGTTATCGCT CGGTCTTGAC CGCGACTCTG GCATCATCAG CCACCTGTTC
GATGAGCGTA ACGAAGCCGT TAAGATCCTA CTGTCTATGG CCATTAAAGC GGCTAAGGCG
AAGGGCGCTT ACATCGGTAT CTGTGGTCAA GGACCTTCAG ATCACGCTGA TTTCGCCGCC
TGGTTAGTTG AGCAAGGCAT CGATACTGTA TCGTTAAACC CAGATACCGT GATTGATACT
TGGTTGTATT TAGCCGAAGC GCACGCTTGA
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| Protein sequence | MQQYVLWYQE LGMGDVNLVG GKNASLGEMI SNLANAGVQV PGGFATTSYA FNEFLEQSGV
NQKIYDILAT LDVDDVNALA QVGAQIRQWV IDTPFQPALE QAIREAYDKL AAETSDASFA
VRSSATAEDM PDASFAGQQE TFLNVKGFDS VLVAIKHVFA SLFNDRAISY RVHQGYEHHG
VALSAGVQRM VRSDKAASGV MFTMDTESGN NDVVFITSSF GLGEMVVQGA VNPDEFYVHK
PILTQGHKAV VRRNIGSKLI QMVYSDDASH GKQVKIEDVA AEKRRQFSIN DAEVMELAKQ
AMVIEKHYGR PMDIEWAKDG NDGKLYIVQA RPETVRSRED VQLIERYHLK SRGAVISEGR
AIGHKVGSGV AKVLTSIADM DQIQPGDVLV TDMTDPDWEP IMKRASAIVT NRGGRTCHAA
IIARELGVPA VVGCGDVTDR IKNGQLVTVS CAEGDTGYIY EGKQEFEVVS NRVDALPELP
MKIMMNVGNP DRAFDFARLP NEGVGLARLE FIINRMIGIH PKALLEFNQQ DAALQEEINE
MIAGYDSPVE FYIARLVEGI ASIGSAFYPK KVIVRMSDFK SNEYANLVGG DRYEPEEENP
MLGFRGASRY ISESFRDCFA LECEAIKRVR NEMGLKNVEV MIPFVRTVKE AEQVIGLLKE
QGLERGKDGL RVIMMCEVPS NALLADQFLE HFDGFSIGSN DLTQLSLGLD RDSGIISHLF
DERNEAVKIL LSMAIKAAKA KGAYIGICGQ GPSDHADFAA WLVEQGIDTV SLNPDTVIDT
WLYLAEAHA
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