Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1589 |
Symbol | |
ID | 4252166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1879030 |
End bp | 1879461 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118202 |
Product | thioesterase superfamily protein |
Protein accession | YP_733723 |
Protein GI | 113969930 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.043779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0906316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACT CGCTCGACTC TAGCCGCCCT GCCTTTTCTG ACGCCATCGA ACAGCGGATC AATCAATCCG AAGCGCGGGT GATCAAAGCC GTATTTCCTT CTATCACCAA TCACCACAAC ACCTTATTCG GTGGCGAAGC GTTAGCTTGG ATGGATGAAA CCGCTTTTAT TGCGGCGACT CGCTTTTGCC GCAAAACCTT AGTGACCGTC AGCTCCGACA GAATCGACTT TAAAAAACCG ATTCCCGCAG GCACCTTAGC TGAACTTATC GCCCGCGTGA TCCATGTGGG AAATACCTCG TTAAAGGTCG AAGTGAATAT TTTCGTCGAA GACATGTATC AAGATCACCG CGAACACGCC ATTCGTGGTG TATTCACCTT TGTTGCGGTT GACGAACAAC GCCACCCAAC TCAAGTGTGG ACTGCTGAAT AA
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Protein sequence | MPNSLDSSRP AFSDAIEQRI NQSEARVIKA VFPSITNHHN TLFGGEALAW MDETAFIAAT RFCRKTLVTV SSDRIDFKKP IPAGTLAELI ARVIHVGNTS LKVEVNIFVE DMYQDHREHA IRGVFTFVAV DEQRHPTQVW TAE
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