Gene Shewmr4_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1589 
Symbol 
ID4252166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1879030 
End bp1879461 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content50% 
IMG OID638118202 
Productthioesterase superfamily protein 
Protein accessionYP_733723 
Protein GI113969930 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.043779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0906316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACT CGCTCGACTC TAGCCGCCCT GCCTTTTCTG ACGCCATCGA ACAGCGGATC 
AATCAATCCG AAGCGCGGGT GATCAAAGCC GTATTTCCTT CTATCACCAA TCACCACAAC
ACCTTATTCG GTGGCGAAGC GTTAGCTTGG ATGGATGAAA CCGCTTTTAT TGCGGCGACT
CGCTTTTGCC GCAAAACCTT AGTGACCGTC AGCTCCGACA GAATCGACTT TAAAAAACCG
ATTCCCGCAG GCACCTTAGC TGAACTTATC GCCCGCGTGA TCCATGTGGG AAATACCTCG
TTAAAGGTCG AAGTGAATAT TTTCGTCGAA GACATGTATC AAGATCACCG CGAACACGCC
ATTCGTGGTG TATTCACCTT TGTTGCGGTT GACGAACAAC GCCACCCAAC TCAAGTGTGG
ACTGCTGAAT AA
 
Protein sequence
MPNSLDSSRP AFSDAIEQRI NQSEARVIKA VFPSITNHHN TLFGGEALAW MDETAFIAAT 
RFCRKTLVTV SSDRIDFKKP IPAGTLAELI ARVIHVGNTS LKVEVNIFVE DMYQDHREHA
IRGVFTFVAV DEQRHPTQVW TAE