Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1586 |
Symbol | |
ID | 4252163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1876085 |
End bp | 1876864 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638118199 |
Product | hypothetical protein |
Protein accession | YP_733720 |
Protein GI | 113969927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0274454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0602505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCA CCTTGGTTCT GATCCTCATC GGTGCACTTT TACTGCTTGT TATCGGAATT AACGTTATAC AACAACAAAA AGAACGTGCT GAGGCTGAAC GTCGCATAGA ATTTGCCCGT CAACGCGCAA TTATTGATGA AACGGAAACC GTATTATCCA ACACAGGGAT GATCCCTTGC AGTACACACA TCATTTTAGT GCTCTATCGT CGTGTGCAAG AAGCGTTAGA AATCGCCACC ACTTTAAGTG CGAGTCAACA GCAATCGGAT TTTCAACGTC GCCTTACCGA TCTGAAATCA CAAATCGAAT CTTTACAATC TAACACTCCA CAGATGCCCC CCATCGAGAA TTTTAGATTG CCGGATAATG ACAAACAGAT CTTAGTGTTA GTACAAACAC TTAAAAAGCT AAAAGCCATT TTACGTGCCG AGCACAATAA AGGCCGAGTC GATCCGAATA TTTTTGCCCA GGAAGAGAAT CGTATCGACA GCTTACAGCT CAGAATTAAC GTTGACTCCA TGCTGTCGCG CGCACGCGCA GCAAGCTTTA TGAAGCAGTA TGGCTCATCT AAACAAATGG TCACGAAAGC ATTAGCAACA TTACATGCCA TTAAAGCGCA AACGCCCAAT GATCCCTTTA TTGCCCGTAA GGTCGATGAA GCCAAGATGC TGTTAGATGA GATTATGGGT GCACAAAAAC TCTCGGCTCC GAGCGCACCT AAATCCAAAA ATGAAGAAGA TGATATCGAT ATGTTGTTTC AACCGAAGAA GAAATGGTGA
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Protein sequence | MTFTLVLILI GALLLLVIGI NVIQQQKERA EAERRIEFAR QRAIIDETET VLSNTGMIPC STHIILVLYR RVQEALEIAT TLSASQQQSD FQRRLTDLKS QIESLQSNTP QMPPIENFRL PDNDKQILVL VQTLKKLKAI LRAEHNKGRV DPNIFAQEEN RIDSLQLRIN VDSMLSRARA ASFMKQYGSS KQMVTKALAT LHAIKAQTPN DPFIARKVDE AKMLLDEIMG AQKLSAPSAP KSKNEEDDID MLFQPKKKW
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