Gene Shewmr4_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1586 
Symbol 
ID4252163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1876085 
End bp1876864 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content43% 
IMG OID638118199 
Producthypothetical protein 
Protein accessionYP_733720 
Protein GI113969927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0274454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0602505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA CCTTGGTTCT GATCCTCATC GGTGCACTTT TACTGCTTGT TATCGGAATT 
AACGTTATAC AACAACAAAA AGAACGTGCT GAGGCTGAAC GTCGCATAGA ATTTGCCCGT
CAACGCGCAA TTATTGATGA AACGGAAACC GTATTATCCA ACACAGGGAT GATCCCTTGC
AGTACACACA TCATTTTAGT GCTCTATCGT CGTGTGCAAG AAGCGTTAGA AATCGCCACC
ACTTTAAGTG CGAGTCAACA GCAATCGGAT TTTCAACGTC GCCTTACCGA TCTGAAATCA
CAAATCGAAT CTTTACAATC TAACACTCCA CAGATGCCCC CCATCGAGAA TTTTAGATTG
CCGGATAATG ACAAACAGAT CTTAGTGTTA GTACAAACAC TTAAAAAGCT AAAAGCCATT
TTACGTGCCG AGCACAATAA AGGCCGAGTC GATCCGAATA TTTTTGCCCA GGAAGAGAAT
CGTATCGACA GCTTACAGCT CAGAATTAAC GTTGACTCCA TGCTGTCGCG CGCACGCGCA
GCAAGCTTTA TGAAGCAGTA TGGCTCATCT AAACAAATGG TCACGAAAGC ATTAGCAACA
TTACATGCCA TTAAAGCGCA AACGCCCAAT GATCCCTTTA TTGCCCGTAA GGTCGATGAA
GCCAAGATGC TGTTAGATGA GATTATGGGT GCACAAAAAC TCTCGGCTCC GAGCGCACCT
AAATCCAAAA ATGAAGAAGA TGATATCGAT ATGTTGTTTC AACCGAAGAA GAAATGGTGA
 
Protein sequence
MTFTLVLILI GALLLLVIGI NVIQQQKERA EAERRIEFAR QRAIIDETET VLSNTGMIPC 
STHIILVLYR RVQEALEIAT TLSASQQQSD FQRRLTDLKS QIESLQSNTP QMPPIENFRL
PDNDKQILVL VQTLKKLKAI LRAEHNKGRV DPNIFAQEEN RIDSLQLRIN VDSMLSRARA
ASFMKQYGSS KQMVTKALAT LHAIKAQTPN DPFIARKVDE AKMLLDEIMG AQKLSAPSAP
KSKNEEDDID MLFQPKKKW