| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1559 |
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| Symbol | |
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| ID | 4252137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1840909 |
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| End bp | 1841547 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118173 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_733694 |
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| Protein GI | 113969901 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TCAGTGATAT TCGCCGCGAA TACACCAAAG GCGGTCTAAG ACGCGCCGAT
TTACCACAAA ATCCCATGCA GCTATTCGAG TTATGGATGA CGCAAGCTCG CGATGCTGAG
CTGAGCGATC CCACGGCGAT GTGTGTTGCC ACCGTCGATG AGCATGGTCA GCCCTATCAG
CGAATTGTGC TGTTAAAGCG CTTCGATGAC TCGGGATTTG TGTTCTTCAC TAACCTAGGT
AGCCGAAAAG CGCAGCAGAT CGCAGCCAAT AATAAGGTGA GTCTGCATTT TCCTTGGCAT
CCGATTGAAC GCCAAGTATC GATTCTCGGT GAGGCGCAGC CACTCTCTAC CGCCGAAGTG
CTGAAATACT TTATGACCCG TCCTAAGGAT AGCCAGATAG CCGCTTGGGT GTCACAGCAG
TCGAGCAAAC TGAGCGCGCG ACAAGTACTC GAAGGTAAGT TCTTTGAAAT GAAAGCCAAA
TTTGCCAAGG GCGATGTGCC CTTACCGAGC TTTTGGGGCG GCTACTTAGT TAAACCCTCG
AGTATCGAGT TTTGGCAGGG CGGGGAGCAC AGGCTGCACG ATCGTTTCCT CTACACTCGC
CAAGCGGATG AATGGGTCAT TGACCGTTTA GCACCTTAA
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| Protein sequence | MTDLSDIRRE YTKGGLRRAD LPQNPMQLFE LWMTQARDAE LSDPTAMCVA TVDEHGQPYQ
RIVLLKRFDD SGFVFFTNLG SRKAQQIAAN NKVSLHFPWH PIERQVSILG EAQPLSTAEV
LKYFMTRPKD SQIAAWVSQQ SSKLSARQVL EGKFFEMKAK FAKGDVPLPS FWGGYLVKPS
SIEFWQGGEH RLHDRFLYTR QADEWVIDRL AP
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