| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1542 |
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| Symbol | |
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| ID | 4252120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1819047 |
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| End bp | 1820969 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118150 |
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| Product | ABC transporter ATPase component |
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| Protein accession | YP_733677 |
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| Protein GI | 113969884 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCTGG TTCGTATCAA TAATGGCTCG TTAGCCTATG GTTATACTCC GCTGCTGCAA
AATGCCGATT TCACTATCGA ACGTGGTGAG CGAGTGTGTA TTGTGGGCCG CAACGGCGCG
GGCAAGTCGA GTCTTTTGAA GATTTTATCC GGCGATGTGC TGCTCGATGA GGGGGAATTC
AACATCGATG GCAGCGTCAC TGTCAGCCGT TTGCAACAAG ATCCACCGAA GGCGGAGCAG
GGCTCGGTCT ATTCTTATAT CGCTGCGGGC TTAAAGGAAG TTGGTGAAGC CTTAGAGCAG
TACCATCAAC TGTCCCATGA TGTGGCCTTT GCCGATCCTG AGCAGATGGA GCGTATGCTC
AATCAAATGC AAAAGCTGCA GGAGACCTTA GATCATCACA ACGGTTGGCA GCTTGACTCG
CGTATCAAAC AAAATTGTGA ATTATTAGGC CTCGATCCCG ATAAATCTTT GAGTGAATTA
TCCGGTGGTT GGCAGCGTAA AGTGGCGCTT GCCCGTGCGC TTGTCAGTGC ACCAGATTTG
TTACTGCTCG ATGAGCCAAC TAACCACTTA GATATCGATA CTATCGAATG GCTGGAAAAA
TTCTTGCTGG ATTTCCAAGG TGCCATTGTA TTTATCAGCC ACGACAGGGG CTTTATTGCC
CGTATGGCAA CTCGCATCGT CGACTTAGAC CGCGGCGTAG TGACCTCATG GCCGGGGAAT
TACCAAGCTT ATCTCGATGG TAAGCAGGAG TGGCTCCGAG TCGAAGCCGA GAAAAATGCA
TTATTCGATA AACGTTTAGC AGAAGAAGAA GTTTGGATCC GCCAAGGCGT TAAGGCCCGT
CGTACCCGCA ACGAAGGCCG CGTGCGTGCA TTGAAAGCAC TGCGCCAAGA ACGCAGCGAA
CGCTTGAATC GTCAGGGCAA TGCTAAGATG GCGGTGGCCG ATACCGATCG TTCGGGTAAG
TTAGTCTTCG ATGTGAAGGA CTTAAACTAC AATCTGCCCG ATAAAAATCT GGTTAAAAAC
TTTAATACTA CGGTATTGCG TGGCGACCGT ATTGCACTTA TTGGCCCGAA CGGTTGTGGT
AAATCGACGC TTATCAAACT ATTGATTGAA AAGTTACAAC CCCAATCGGG TGAGGTAAAA
GTCGGTACTA AGTTAGAGAT TGCCTATTTC GACCAATACC GTGAGGCGCT AGATCCTGAG
CAAACCGTTG AAGATAACGT GGGTGAGGGT AAAAAGACCA TCACCATTAA TGGTCAAGAC
CGTCATATCT TAAGTTATCT GCAGGACTTC TTATTTTCGC CGATGCGCGC TCGTACTCCA
GTGAAGGCAT TATCGGGTGG TGAGAAAAAC CGATTACTGC TTGCTAAGCT CCTTATTCGT
CCCGCTAACC TGATTATCCT CGACGAACCG ACAAACGATC TTGATATTGA GACCCTAGAA
TTGCTAGAGT CGCTGCTGAC TGAATATCAA GGCACACTGT TACTCGTGAG CCATGATAGG
GCCTTTATCG ATAACACTGT CACCAGCAGC TGGTGGTATG CGGGTAATGG GCATTGGAGC
GAGTATGTCG GTGGTTATCA AGACGCTATA GACCAAGGGG CAAAGTTTTA TTCTGAGGAA
CCTAGTCAGC CAAACACGGT CGAAGCTCCT GCGACAGCTA AAACCGCTGA GGTTAAAGTG
GCCGAGCCCG CCAAAGCCGC GAAAAAACTG TCCTACAAGT TACAGCGTGA ATTAGAGGCC
ATGCCAGAGC TGATGGAAAA ATTAGAGGCT GAAATCCTCG AATTACAAAC CACAGTGGCC
AGCCCAGATT TTTATAGTCA GACACAGGAT AAAATCAATC AGACATTGAA CCTGTTAGCG
GATAAAGAAA AGCAATTGGA AGTTTGCTTC GAGCGATGGG AAGAGCTTGA GTCACTGAAG
TAA
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| Protein sequence | MSLVRINNGS LAYGYTPLLQ NADFTIERGE RVCIVGRNGA GKSSLLKILS GDVLLDEGEF
NIDGSVTVSR LQQDPPKAEQ GSVYSYIAAG LKEVGEALEQ YHQLSHDVAF ADPEQMERML
NQMQKLQETL DHHNGWQLDS RIKQNCELLG LDPDKSLSEL SGGWQRKVAL ARALVSAPDL
LLLDEPTNHL DIDTIEWLEK FLLDFQGAIV FISHDRGFIA RMATRIVDLD RGVVTSWPGN
YQAYLDGKQE WLRVEAEKNA LFDKRLAEEE VWIRQGVKAR RTRNEGRVRA LKALRQERSE
RLNRQGNAKM AVADTDRSGK LVFDVKDLNY NLPDKNLVKN FNTTVLRGDR IALIGPNGCG
KSTLIKLLIE KLQPQSGEVK VGTKLEIAYF DQYREALDPE QTVEDNVGEG KKTITINGQD
RHILSYLQDF LFSPMRARTP VKALSGGEKN RLLLAKLLIR PANLIILDEP TNDLDIETLE
LLESLLTEYQ GTLLLVSHDR AFIDNTVTSS WWYAGNGHWS EYVGGYQDAI DQGAKFYSEE
PSQPNTVEAP ATAKTAEVKV AEPAKAAKKL SYKLQRELEA MPELMEKLEA EILELQTTVA
SPDFYSQTQD KINQTLNLLA DKEKQLEVCF ERWEELESLK
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