| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1540 |
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| Symbol | rlmL |
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| ID | 4252118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1816672 |
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| End bp | 1818813 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118148 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_733675 |
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| Protein GI | 113969882 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAATT TTTTTGCTGC CGCCCCTAAG GGCTTTGAAT ATAGCTTAGC CCAAGAACTG
ACAGAATTTG GTGCGACTGA GATTAAAGAA AGTGTTGCCG GTGTCTATTT TACCGCGCCG
CTTGCCTTAG CTTACCGTAT TACCCTGTGG ACACGTTTGG CCAGCCGTAT CGTGCTGGTG
ATCTATAAGG GCCCCTGTGA GTCGGCGGAG CAATTATATA ACGCAGCTTA TTGTATTGAT
TGGTCATCCC ATTTCTCCAA TCGCAACACC TTTAGTATCG ATTTTCACGG CACTGGCGGC
TTTATCAACA ACACCCAGTT TGGTGCGTTA AAGATTAAAG ATGCGATTGT TGACCGTTTC
CGTGATGACG GTGATGCCCG TCCAAACGTC GCCCGTATCG ATGCCGACAT TAAAATCGAC
GCCCATTTCC GTAATGGGGT GATTACCATT GCGATGAACT TCTCGGGACC TTCCTTGCAT
CAACGCGGTT ATCGCTCTAC GACCGGTGAA GCCCCATTAA AAGAAAACCT CGCCGCCAAC
ATGTTAGTAC GCAGTGGCTG GAAAGCCGCG CCAACCACCT TGCTCGATCC TTTCTGCGGT
AGCGGTACTG TGCTGATTGA GGCCGCATTA ATGGCTGCCG ATATTGCCCC AGGATTGCAG
CGCAGCCGTT TTGGTTTTGA ACATTGGCGC CGCCACGATA AAGCCACCTG GCATGAGATT
TTAGAAGAGG CCAAGGCGCG CGCATCCTTA GGTGTAAAAC GTTGTGACGT GAAGTTCTAC
GGCTCGGATA TCGATTCGCG CTTAGTGGCA CTGGCAAAAC GTAATGCGCA AAACGCCGGT
GTACTTGAAC TGATTGACTT TAAAGTGGCT AATGCGCTGA ATGTCGAGCC GCCCGCTGGC
GAAGGTTACT TGATTACTAA CCCTCCCTAC GGTGAACGTT TAGGCAGTGT CTCTGAGCTA
TTACAGCTGT ATTACCAATT AGGCGACAAG TTTAAGAAGG AGTTTGGCGG CTGGAAAGTG
GCCATGCTCT GTAGCGATAT CGAGCTGATT TCGGCGCTTA AACTCAAAGC CGATAAGCAG
ATGAAGATGT TTAACGGTGC GCTAGAGTGT GCCTTTAACC TTTATACCTT GCACGCGCAA
AGTACTCGCC GTGATACGCC TGTATTGCCA GAAGGCGTGG ATATTGCCGA TATCGCACCA
GCTTTTGCGA ACCGTATTAA GAAAAACGCT AAGCAATTAG AAAAGTGGGC GAAAAAAGAA
GGTATCGACA GTTACCGTTT ATATGATGCC GACATTCCCG AATATAACGT CGCGGTCGAC
CGCTATTTAG ACCATATCGT GGTGCAGGAA TATATGGCGC CAGCCAGTAT TCCAGAGGCC
GTGACAAAAC GCCGTTTAAG CGATGTGCTA CTGGCTCTGC CTGCTGCTAT TGGTGTCGAT
CCGCATAAGA TCACTATGAA GACCCGTGAG CGTCAAAAGG GCACTAATCA ATATCAAAAG
CTGGATGAGC GTAAGCTTGA ACTTATCACC ACCGAATATG GCGCTAAGTT TAAGCTGAAC
CTGACGGGCT ATTTGGATAC AGGCTTGTTC CTTGACCACA GATTAACCCG CCGTTTAGTG
GGACAAAAAT CGAAAGGGCG CCGGGTATTG AACCTGTTCT CTTACACTGG TTCCGCCTCT
GTGCATGCCG CATTAGGTGG CGCTAAGTCG GTCACCACGG TTGATATGTC AAACACCTAT
CTGGCGTGGG CGAAGGAAAA CTTTGCGTTA AACGATCTCA GTGGCAAGCA GTATGAGTTT
GTTCAGGCCG ATTGTTTGCA ATGGATCCGC GATAGTGCGC TCGATAAATC CGCGCAATAT
GATTTGATTT TTATCGATCC GCCGACCTTC TCTAACTCCA AGCGGATGGA AGATTCCTTC
GATGTGCAAC GTGACCATGT GAATTTACTC GGCATGCTCA TCAAGCTGTT AAGTCCAAAT
GGGGAGATAG TGTTCTCCAA CAACAAACGC AAGTTTAAGA TGGACACTGA AACCTTGGCC
AAGATGAAAA TCAAGGTGGA AAACATCGAT GATCTGACCT TGCCTATGGA TTACAAGCGC
AATCCCCATA TCCATAACAC TTGGCTTATC ACCCATGCAT AA
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| Protein sequence | MLNFFAAAPK GFEYSLAQEL TEFGATEIKE SVAGVYFTAP LALAYRITLW TRLASRIVLV
IYKGPCESAE QLYNAAYCID WSSHFSNRNT FSIDFHGTGG FINNTQFGAL KIKDAIVDRF
RDDGDARPNV ARIDADIKID AHFRNGVITI AMNFSGPSLH QRGYRSTTGE APLKENLAAN
MLVRSGWKAA PTTLLDPFCG SGTVLIEAAL MAADIAPGLQ RSRFGFEHWR RHDKATWHEI
LEEAKARASL GVKRCDVKFY GSDIDSRLVA LAKRNAQNAG VLELIDFKVA NALNVEPPAG
EGYLITNPPY GERLGSVSEL LQLYYQLGDK FKKEFGGWKV AMLCSDIELI SALKLKADKQ
MKMFNGALEC AFNLYTLHAQ STRRDTPVLP EGVDIADIAP AFANRIKKNA KQLEKWAKKE
GIDSYRLYDA DIPEYNVAVD RYLDHIVVQE YMAPASIPEA VTKRRLSDVL LALPAAIGVD
PHKITMKTRE RQKGTNQYQK LDERKLELIT TEYGAKFKLN LTGYLDTGLF LDHRLTRRLV
GQKSKGRRVL NLFSYTGSAS VHAALGGAKS VTTVDMSNTY LAWAKENFAL NDLSGKQYEF
VQADCLQWIR DSALDKSAQY DLIFIDPPTF SNSKRMEDSF DVQRDHVNLL GMLIKLLSPN
GEIVFSNNKR KFKMDTETLA KMKIKVENID DLTLPMDYKR NPHIHNTWLI THA
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