Gene Shewmr4_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1522 
Symbol 
ID4252100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1789919 
End bp1790470 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID638118121 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_733657 
Protein GI113969864 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01656] histidinol-phosphate phosphatase family domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.62604e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.517772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACAG TCAATCGAGC CGTATTTTTA GACCGTGATG GTGTGATCAA CAAAGATCAT 
GGTTATGTGC ATCAGGTGGA TGACTTTGAA TATATAGAAG GTGTGTTTGA AGCCTGCCTC
GCCTTAAAGC AAATGGGATA CAAATTGGTG GTGGTCACCA ATCAGTCGGG GATTGCCCGT
GGCATGTATA CTGAAGATCA ATTCCACAGT CTCACCGAAT GGATGGATTG GAACTTTGCC
GATAAAGGTG TTGACCTCGA TGGCATCTAT TATTGCCCGC ACCATAATGA AAAAGGTCTC
GGTGAATATA AAGTCGATTG CGATTGCCGC AAGCCAAAAC CTGGCATGCT ACTCGATGCG
GCAAAATTCC TGAAAATCGA TTTGTCGCAG TCGGTGATGG TGGGCGATAA AGCAGACGAT
ATGCTTGCGG CCAAAGAGGC AGGGGTCCCG ACGCGTATCC TCGTCCGTAC TGGTAAAGCA
ATCGCTGATG ATAGTGAGGC GTCTGTCGTG CTCGATAGCA TTGCCGATGT GCCGGGATTT
TTAAAGAAGT AG
 
Protein sequence
MGTVNRAVFL DRDGVINKDH GYVHQVDDFE YIEGVFEACL ALKQMGYKLV VVTNQSGIAR 
GMYTEDQFHS LTEWMDWNFA DKGVDLDGIY YCPHHNEKGL GEYKVDCDCR KPKPGMLLDA
AKFLKIDLSQ SVMVGDKADD MLAAKEAGVP TRILVRTGKA IADDSEASVV LDSIADVPGF
LKK