| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1497 |
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| Symbol | |
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| ID | 4252075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1755543 |
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| End bp | 1758194 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638118096 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_733632 |
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| Protein GI | 113969839 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0195918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTA ATTCGACATT AGCCAAAGCG GTTCGCTTTG CGTTAATTGG TGGTGCCACA
ACAGCGGCTT TATCTAGCAC TGCTGTTTAT GCGGCAGAGG AGAATGCTAA GGTAGAACGT
ATTGAAGTAA CGGGATCTCG TATTCAAAGA ACGGATATGG AATCTGCTTT ACCTGTTACT
GTTTTATCAG CAGAAGATAT TGCCAAAACA GGTTTAAGTG ATGTTTCTGC TGTTTTAGCA
CAAATGCCAT TTAACACTGC TGGTAGTTTT ATTAGTGATG CAGGTAGCTC TGCAAGTAAC
CACGCCAGTT CTGGTATGCG TGGTTTAGGT TCAAACCGCA CGTTAACCTT GATCAACGGT
CGCCGTATTG CGCCATCTGC AACCTTTGGT GGCGATTCAA CGAACCTCAA CTTAATCCCT
ATGGATGCAA TCGAGCGTAT TGAAATTTTA CGTGACGGTG CATCGGCAAT TTACGGTTCG
GATGCTATCG GTGGTGTAAT TAACATCATC CTAAAGAAAA CGTTCGATGG TTTAGCATTC
GACGCAAAAT TTGGTAGTCC AACTCAAGGT GGTAGAGATG AGAAATCAGC TTCTGTCACT
TTCGGTAATA CTAGCGATAA AAGCAACAGC TTAGTGATCA TCGAGCACAA GCAATTTGAT
CCACTACAAG GTGGCCAACG TCCTCACTTA ACGGCTAACT GGGATAAGAA ATACGGTCGT
AGCGGCTTGT ATGCGCCAGA AGGTACATAT CGTCCAGTTG AATCTCGCCC TGTTAAAGGT
GCTGATGGTA CTTTCGGCAC TCCTGTTTAT ACAGGTTTGC AAGTTCCAGG TAAGGACTGC
CCTGCAGATC GTATTGTTAC CAGCAAAGAC GGTTCAGCTT GTGGTTTTAA CCAGTTTGAT
GGCACAGACT ATTTACCCGA TCAGACAAAA GACTCTGTAT TCTCTAATAT GACTTACCGT
ATTACCGATG AATTAGAGTG GTTTGGTCAA GCTATCGTTA TGCGAGACAA ATCCAGTACT
TCTTCAACTG CGCTATGGAC TCCTAACTTA TACATGGCGG CAGATAATCC ATTAAACCCA
ACATTCGGTA CCGCTAATGC ATCAGAAGTG CAAGCCTATC ACCGTTTGAA AGGTGTAGCA
GACCGTAAAA CAGAATTCGA CTCAAACGTA GTTGATATCG TAACGGGTCT AAACCTTGAA
TTAGATGCAG GCTCTTTGAG CTGGTACGTA CAATACTCAG ATCAAATCGT AAACATTGAA
ACTGACTCTT ATGTATTCGA AGATAAGTTA CAAGAAGCGG TAGATAAAGG CTTGTACAAC
CCATTCGTTG AGGGTGGTAA TGCGACCCAA GAGACTTTAG ATACTTTCCT ACACACAGCC
ACTCGTAAAG CAACCTCAAA TACGACTGGT ACTGGATTAT CTTGGGCAGC CCTTGCTCCA
ATTTCATTGC CTGGTGGTGA CTTAGGTTAC GCAGTAGGTA TGGAATACCA AAAAATCGAA
TACAAAGATA CCCGTGATGC TCAACAAGCC GCAGGTAACG TATTAGGAAC TTATGGTGGT
GATTCTGCTG GTGACAGAAG CTATAAAGCG GCATTCGTTG AGTTGGAACT GCCAGTATTA
GATCACTTAA ACGTGAAACT AGCGAGCCGT TACGACCAAT ATAGCTTGCC CGATGTTGGC
CAGCTTTCAA GCTCTGTAAA CGTACGTTAC GAAGCATTGG ACAACTTAGT GTTACGTGCA
TCTTACGGCC AAGGCTTTAG AGCACCTTCA CTGGATGACC TGTTAGGCAA GCCAGCAACC
AGTTATGACA GAATCACTGA CACAACCCTG TGTCAAAGTC TGCCAGATGA CCAAAAAGAC
GGCAACCCAG CTTGTGAAGA TAACCAATAC CTACGTAAGA GTTCAGGTAA CAAAGAGCTA
GATCCAGAGA AATCTGCTCA GTACTCTTTC GGTGCCGTAT GGAATATCAC TGAAAACATC
GACTTAGTTG TTGATTACTA CAACATCGAA ATCACAGACC AAGTCAGCTA CATCGATGCA
CAAACAATCG TTGACTTAGA AGCGATTGGT GGCTTAGGTG CTTATGACCC TAACTACATC
TACGTCAAAC GTAAAGATGA CGGCACCATC GATGAAATTG GCGCTGGCAA CATCAACATG
GATGGCGTGC AAACATCAGG TCTTGACGTG TCATTCACAT CAAACTTCGA TTTTGCTGAA
TTTGGTGCAT TTAAGTTTGC GGTTGAAGGA ACCTATGCTC TTGAATACAC AGAGCAAGCA
AGCCCGATAG CTAAACGTTA TGACGTATTA GGTACTAAGG GTTATCCACC ACTACGTTTC
AACACAACAT TTAGCTACGC CATTGATGAC TTCTCAGCAT CTTTGATTGC TAAGTACATT
GATTCTTATG ATGGTGAAAC TCCACAACAA CAAGAAGTTG GCACAAATAA ACAAGACTTC
TCATCGTTCA CAACGTGGGA TCTGACATTG AACTACGACT TCGACAGCTA TGGCAAAGTC
ACAGTAGGTG CTCGTAACTT GTTCGATGCA ATGCCAACAG TTAACTACAG CTTAGGCTAC
CCTGGATACG ATACTGACAC CCATAACATC GTGGGCCGTG TAGTGTTTGC AGGATACAAA
GTGAAATTCT AA
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| Protein sequence | MRANSTLAKA VRFALIGGAT TAALSSTAVY AAEENAKVER IEVTGSRIQR TDMESALPVT
VLSAEDIAKT GLSDVSAVLA QMPFNTAGSF ISDAGSSASN HASSGMRGLG SNRTLTLING
RRIAPSATFG GDSTNLNLIP MDAIERIEIL RDGASAIYGS DAIGGVINII LKKTFDGLAF
DAKFGSPTQG GRDEKSASVT FGNTSDKSNS LVIIEHKQFD PLQGGQRPHL TANWDKKYGR
SGLYAPEGTY RPVESRPVKG ADGTFGTPVY TGLQVPGKDC PADRIVTSKD GSACGFNQFD
GTDYLPDQTK DSVFSNMTYR ITDELEWFGQ AIVMRDKSST SSTALWTPNL YMAADNPLNP
TFGTANASEV QAYHRLKGVA DRKTEFDSNV VDIVTGLNLE LDAGSLSWYV QYSDQIVNIE
TDSYVFEDKL QEAVDKGLYN PFVEGGNATQ ETLDTFLHTA TRKATSNTTG TGLSWAALAP
ISLPGGDLGY AVGMEYQKIE YKDTRDAQQA AGNVLGTYGG DSAGDRSYKA AFVELELPVL
DHLNVKLASR YDQYSLPDVG QLSSSVNVRY EALDNLVLRA SYGQGFRAPS LDDLLGKPAT
SYDRITDTTL CQSLPDDQKD GNPACEDNQY LRKSSGNKEL DPEKSAQYSF GAVWNITENI
DLVVDYYNIE ITDQVSYIDA QTIVDLEAIG GLGAYDPNYI YVKRKDDGTI DEIGAGNINM
DGVQTSGLDV SFTSNFDFAE FGAFKFAVEG TYALEYTEQA SPIAKRYDVL GTKGYPPLRF
NTTFSYAIDD FSASLIAKYI DSYDGETPQQ QEVGTNKQDF SSFTTWDLTL NYDFDSYGKV
TVGARNLFDA MPTVNYSLGY PGYDTDTHNI VGRVVFAGYK VKF
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